Protein Alignment Rab39 and Rab6a

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_077249.1
• Gene: Rab6a / 19346
• MGIID: 894313
• Length: 208
• Species: Mus musculus
• Alignment Length: 201
• Identity: 73/201 - (36%)
• Similarity: 116/201 - (57%)
• Gaps: 22/201 - (10%)

  Fly     9 QFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFR 73
            :|:|:.:|:.:|||:||:..|....|......|:|:||.::.:.::|.| ::|||||||||||||
Mouse    13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFR 76

  Fly    74 SITKSYYRNSVGVLLVYDISNHASFEHIPLWM--MEAQRHIEPHRPVFALVGCKLDLINAGGHRE 136
            |:..||.|:|...::||||:|..||:....|:  :..:|..:   .:..|||.|.||.:   .|:
Mouse    77 SLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSD---VIIMLVGNKTDLAD---KRQ 135

  Fly   137 VTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSRPN 201
            |:.||.::.||:..:.|:||||::|.||::.||.|     |....|....:|.        ||.:
Mouse   136 VSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRV-----AAALPGMESTQDR--------SRED 187

  Fly   202 SLDFNL 207
            .:|..|
Mouse   188 MIDIKL 193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	73/201 (36%)
Rab6a	NP_077249.1	Rab6	14..174	CDD:206654	67/171 (39%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P20340	32..50		4/17 (24%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P20340	69..88		13/18 (72%)