Protein Alignment Rab39 and rab-28

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_501609.1
• Gene: rab-28 / 189429
• WormBaseID: WBGene00004281
• Length: 248
• Species: Caenorhabditis elegans
• Alignment Length: 213
• Identity: 60/213 - (28%)
• Similarity: 98/213 - (46%)
• Gaps: 29/213 - (13%)

  Fly    11 RLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRSI 75
            :::::||...||:|:.:.|....|.:....|:|:|||:|.|.:....|:.:|:||..||.....:
 Worm    37 KIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEM 101

  Fly    76 TKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIE-PHRPV-FALVGCKLDLINAGGHREVT 138
            ...|...:..|.||||::|..|||:...|:...:::.: ...|| ..|:|.|.||    ..|.|.
 Worm   102 IDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDL----EERRVV 162

  Fly   139 TEEAQK-FAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDGWDGIKSGFSRPN- 201
            :.||.| ||..:.:.....||::|..|...||....||                 :..|.||..
 Worm   163 SVEAHKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEV-----------------LNVGLSRAEV 210

  Fly   202 SLDFNL----VVAEPEKS 215
            ..|..:    |:.:|::|
 Worm   211 EADIEIVQGSVIEQPKQS 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	60/213 (28%)
rab-28	NP_501609.1	Rab28	36..248	CDD:206694	60/213 (28%)