DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and Rab7

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_061503430.1 Gene:Rab7 / 1281557 VectorBaseID:AGAMI1_003741 Length:237 Species:Anopheles gambiae


Alignment Length:173 Identity:58/173 - (33%)
Similarity:108/173 - (62%) Gaps:11/173 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRSI 75
            ::|::|||:|||:||:..:.:.:|:.....|:|.||..:.:.: |...:.:|:|||||||||:|:
Mosquito    10 KVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVI-DERVVTMQIWDTAGQERFQSL 73

  Fly    76 TKSYYRNSVGVLLVYDISNHASFEHIPLW----MMEAQRHIEPHRPVFALVGCKLDLINAGGHRE 136
            ..::||.:...:||||.:...:|:::..|    :::|......|.| |.::|.|:||.|    |.
Mosquito    74 GVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFP-FVVLGNKIDLEN----RA 133

  Fly   137 VTTEEAQKFAK-QHGLHFVETSARSGANVEEAFRMVTQEVYAR 178
            |:|:.||::.: ::.:.:.||||:.|.||:.||:.:.:...|:
Mosquito   134 VSTKRAQQWCQTKNDIPYFETSAKEGINVDLAFQTIAKNAIAQ 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 58/173 (34%)
Rab7XP_061503430.1 None

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