DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and Rab9

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_318959.4 Gene:Rab9 / 1279264 VectorBaseID:AGAMI1_007884 Length:233 Species:Anopheles gambiae


Alignment Length:212 Identity:73/212 - (34%)
Similarity:111/212 - (52%) Gaps:23/212 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFRSI 75
            :::::||..||||.|:..|....|...|..|:||:|..:.|:: |..:..||:||||||||||::
Mosquito    14 KVVILGDGNVGKSCLMNRFVSNYFDANSFHTIGVEFLNKDIQV-DQERFTLQIWDTAGQERFRAL 77

  Fly    76 TKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRH--IEPHRPVFALVGCKLDLINAGGHREVT 138
            ...:||.:...||.|.|::..||..:..|..|..|:  :.|....|.:||.|.||..|  .||||
Mosquito    78 RTPFYRGTDICLLTYAINDRLSFRALASWRDEFLRYYDVNPDHFPFVVVGTKNDLPPA--QREVT 140

  Fly   139 TEEAQKFAKQHGL-HFVETSARSGANVEEAFRMVTQEVYARIRSGE----YKAEDGWDGIKS--- 195
            .||..::.::|.: .::||||::..||..||.:..|:.....||.|    .:.:|..|.:||   
Mosquito   141 AEEVSQWCQEHHITAYIETSAKTSENVATAFALAVQQWRKLERSTERELRAQGQDTIDLMKSVNL 205

  Fly   196 ----------GFSRPNS 202
                      |..||.:
Mosquito   206 NANRNRFCCAGLGRPTA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 73/212 (34%)
Rab9XP_318959.4 None

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