Protein Alignment Rab39 and Rab8a

DIOPT Version :10

• Sequence 1: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_446450.2
• Gene: Rab8a / 117103
• RGDID: 621144
• Length: 207
• Species: Rattus norvegicus
• Alignment Length: 177
• Identity: 77/177 - (43%)
• Similarity: 118/177 - (66%)
• Gaps: 11/177 - (6%)

  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70
            ::|.|:|:|||||.|||:.:|..|::..|......|:|:||..|.||: ||.:||||:|||||||
  Rat     5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQE 68

  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFA---LVGCKLDLINAG 132
            |||:||.:|||.::|::|||||:|..||::|..|:    |:||.|.....   ::|.|.|:   .
  Rat    69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWI----RNIEEHASADVEKMILGNKCDV---N 126

  Fly   133 GHREVTTEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARI 179
            ..|:|:.|..:|.|..:|:.|:||||::..|||.||..:.:::.|::
  Rat   127 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	77/175 (44%)
Rab8a	NP_446450.2	Rab8_Rab10_Rab13_like	6..172	CDD:206659	76/173 (44%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P62820	31..45		3/13 (23%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P62820	63..80		13/16 (81%)