DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab39 and rab22a

DIOPT Version :10

Sequence 1:NP_572405.2 Gene:Rab39 / 31684 FlyBaseID:FBgn0029959 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_991282.2 Gene:rab22a / 100001531 ZFINID:ZDB-GENE-041114-161 Length:196 Species:Danio rerio


Alignment Length:167 Identity:59/167 - (35%)
Similarity:100/167 - (59%) Gaps:5/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQERFR 73
            :.::.|:||:.|||||::..|.:..|....:||:|..|..:.::.::... |..:||||||||||
Zfish     5 ELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELH-KFLIWDTAGQERFR 68

  Fly    74 SITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHREVT 138
            ::...|||.|...::||||:...||:.:..|:.|.::| .|...|.|:.|.|.||.:|   |||:
Zfish    69 ALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQH-GPPNIVVAIAGNKCDLSDA---REVS 129

  Fly   139 TEEAQKFAKQHGLHFVETSARSGANVEEAFRMVTQEV 175
            .::|:.:|......|:||||::..|:.|.|..:::.:
Zfish   130 EKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab39NP_572405.2 Rab39 8..218 CDD:133311 59/167 (35%)
rab22aNP_991282.2 Rab5_related 5..167 CDD:206653 59/167 (35%)

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