DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and PTC2

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_011013.1 Gene:PTC2 / 856823 SGDID:S000000891 Length:464 Species:Saccharomyces cerevisiae


Alignment Length:407 Identity:89/407 - (21%)
Similarity:146/407 - (35%) Gaps:138/407 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIKPMYE 154
            ||||||.||...:....:::          ::|:||       :||   |..|:           
Yeast    59 GIFDGHGGAKVAEYCGNKIV----------EILQEQ-------KSF---HEGNL----------- 92

  Fly   155 ASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVHIEGLQ- 218
                         |:     .|::.|:..|.::.|:.:...|       .||..|..:.:...| 
Yeast    93 -------------PR-----ALIDTFINTDVKLLQDPVMKED-------HSGCTATSILVSKSQN 132

  Fly   219 -MHVASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQ 282
             :...:.||...||..      ..::|.|:.:|.....||..||:|.....|.:.|  ||    .
Yeast   133 LLVCGNAGDSRTVLAT------DGNAKALSYDHKPTLASEKSRIVAADGFVEMDRV--NG----N 185

  Fly   283 LAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELG-PNDKFLVIAS 346
            ||..||.|||.:|.:.::..::.:                 :|..||:.:|.|. ..|:|:::|.
Yeast   186 LALSRAIGDFEFKSNPKLGPEEQI-----------------VTCVPDILEHSLDYDRDEFVILAC 233

  Fly   347 DGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVDQNAATHL 411
            ||:||.|...:.|.||  |:.         |.|| .||.|||.::.:.....|.:          
Yeast   234 DGIWDCLTSQDCVDLV--HLG---------LREG-KTLNEISSRIIDVCCAPTTE---------- 276

  Fly   412 IRHALGGTDYGIEHSKISYYLTLP-----------------RDAVRLYRDDITITVIYF-----N 454
                  ||..|.::..|.....|.                 |.:||.:.|.......|:     |
Yeast   277 ------GTGIGCDNMSIVVVALLKEGEDVAQWSDRMKSKAHRTSVRSFADKRRRVFSYYDFSKCN 335

  Fly   455 SEHIAKLHSDVDQTEVT 471
            .|.:..:.:...|.:.|
Yeast   336 DEQVFAITTKKPQDKFT 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 74/306 (24%)
PTC2NP_011013.1 PP2C 23..279 CDD:395385 76/332 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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