DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and PTC4

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_009683.1 Gene:PTC4 / 852422 SGDID:S000000329 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:359 Identity:83/359 - (23%)
Similarity:138/359 - (38%) Gaps:93/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QLSPYDVNLVLRENEFVYNFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHRNGFICGIFDGHAG 97
            :|:..|.:|:..||..||....:..|..|||..|.                    :..:||||.|
Yeast    43 RLTQEDAHLIRNENSVVYVRFFNPFIDKYETLSLN--------------------VFAVFDGHGG 87

  Fly    98 AACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLK--------------CHNDNVDFVSM 148
            ..|.        :::|.....|.........|..:...:|              .:||:..|   
Yeast    88 DDCS--------KFLSGGRHHRDGNGSSNGNGEPNAGLIKWIAYSFENHHYTSTTNNDSSKF--- 141

  Fly   149 IKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVH 213
                 :.||        .|.:..||....:||:..|||:.:....|      :...:..|||:::
Yeast   142 -----KRSF--------NTLEGLVSQIFKDAFILQDEELYRHFANS------SCGSTAVVACIIN 187

  Fly   214 IEGLQMHVASTGDCGAVL-----GVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETV 273
            .|.|  :||:.||...:|     |:          |.::.:|...::.|:.||      .::...
Yeast   188 EESL--YVANCGDSRCILSSKSNGI----------KTMSFDHKPQHIGELIRI------NDNGGT 234

  Fly   274 IRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPP---YLTARPDVQQHEL 335
            :..||:...||..|||.||::|.......::.......|.:  .|.|||   .:|..|||..|::
Yeast   235 VSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNL--TYGTPPQEAQVTVEPDVLMHKI 297

  Fly   336 G-PNDKFLVIASDGLWDFLPPSEVVSLVGEHINS 368
            . ..|:|||:|.||:||.....:::..:..|:.|
Yeast   298 DYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 76/334 (23%)
PTC4NP_009683.1 PP2C 82..355 CDD:395385 71/300 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2687
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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