DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and PTC1

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_010278.3 Gene:PTC1 / 851558 SGDID:S000002164 Length:281 Species:Saccharomyces cerevisiae


Alignment Length:451 Identity:86/451 - (19%)
Similarity:136/451 - (30%) Gaps:216/451 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SPYDV--NLVLRENE-------------FVYNFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHR 84
            :|||:  .:.:.||:             :|.||.                     ||.:..:.  
Yeast    13 TPYDITYRVGVAENKNSKFRRTMEDVHTYVKNFA---------------------SRLDWGYF-- 54

  Fly    85 NGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMI 149
                 .:||||||....:...|.|           ..:.||                        
Yeast    55 -----AVFDGHAGIQASKWCGKHL-----------HTIIEQ------------------------ 79

  Fly   150 KPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSG--AVACLV 212
                         .:|....|||...|.::||.:||||:          |..|..||  |..|::
Yeast    80 -------------NILADETRDVRDVLNDSFLAIDEEIN----------TKLVGNSGCTAAVCVL 121

  Fly   213 HIE---------------GLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRIL 262
            ..|               ..:::.|:.||...||      .:..:|.:|..:|.|.:..|::|: 
Yeast   122 RWELPDSVSDDSMDLAQHQRKLYTANVGDSRIVL------FRNGNSIRLTYDHKASDTLEMQRV- 179

  Fly   263 AEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTAR 327
                 |:...:|...|:...||..|:.||   |:...:                       :...
Yeast   180 -----EQAGGLIMKSRVNGMLAVTRSLGD---KFFDSL-----------------------VVGS 213

  Fly   328 PDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLA 392
            |.....|:...||||::|.|||||.:...:...|:      |.|.||                  
Yeast   214 PFTTSVEITSEDKFLILACDGLWDVIDDQDACELI------KDITEP------------------ 254

  Fly   393 ERKAGLTRKPVDQNAATHLIRHAL-GGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVIY 452
                        ..||..|:|:|| .||                       .|::|:.|::
Yeast   255 ------------NEAAKVLVRYALENGT-----------------------TDNVTVMVVF 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 67/352 (19%)
PTC1NP_010278.3 PP2Cc 12..279 CDD:214625 85/448 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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