DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp and PLL2

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_195860.1 Gene:PLL2 / 830937 AraportID:AT5G02400 Length:674 Species:Arabidopsis thaliana


Alignment Length:324 Identity:79/324 - (24%)
Similarity:134/324 - (41%) Gaps:91/324 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 TPQRDVSSELVNAFLQLDE---EISQEALTSNDVRTMNVALSGAVACLVHIEGLQMHVASTGDCG 228
            |..:||...|:.|..:.::   |::.:.:..|.    .:||.|:...:..::|..::|.:.||..
plant   392 TNHKDVLKALLQALRKTEDAYLELADQMVKENP----ELALMGSCVLVTLMKGEDVYVMNVGDSR 452

  Fly   229 AVLGVLDPQTQQWHSK-------------------------------KLNIEHNADNMSEVRRIL 262
            |||| ..|.......:                               :||:||:.....|||||.
plant   453 AVLG-RKPNLATGRKRQKELERIREDSSLEDKEILMNGAMRNTLVPLQLNMEHSTRIEEEVRRIK 516

  Fly   263 AEHPKEEHETVIRNGRLLSQLAPLRAFG-DF--RYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYL 324
            .|||  :.:..:.|.|:...|...|||| .|  :.||:..:::     ||.:..:.    |.||:
plant   517 KEHP--DDDCAVENDRVKGYLKVTRAFGAGFLKQPKWNDALLE-----MFRIDYIG----TSPYI 570

  Fly   325 TARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQ 389
            |..|.:..|:|...||||:::||||:::....|.:..|...|::        .||||        
plant   571 TCSPSLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVESFISA--------FPEGD-------- 619

  Fly   390 QLAERKAGLTRKPVDQNAATHLIRHAL--GGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVI 451
                             .|.|||:..|  ....:|::..::   |.:|:...|.|.||:::.||
plant   620 -----------------PAQHLIQEVLLRAANKFGMDFHEL---LEIPQGDRRRYHDDVSVIVI 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 65/263 (25%)
PLL2NP_195860.1 PP2Cc 259..665 CDD:238083 79/324 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D461546at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2427
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.