DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and AT3G16560

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001325978.1 Gene:AT3G16560 / 820905 AraportID:AT3G16560 Length:493 Species:Arabidopsis thaliana


Alignment Length:431 Identity:105/431 - (24%)
Similarity:179/431 - (41%) Gaps:92/431 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SPYDVNLVLRENEFVYNFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHRNGFI-CGIFDGHAGA 98
            ||..||              :|.:.|....|:......|| |.:|.....||:: |.|:||..|.
plant   136 SPSSVN--------------EGFLLSAMEVQVAGGAAGED-RVQAVCSEENGWLFCAIYDGFNGR 185

  Fly    99 ACGQVVSKRLLRYVSAATLPRQVLREQMKQ---GADSQSF-LKCHNDNVDFVSMIKPMYEASFLK 159
            .....::..|...:   ....|:|..||||   ..|.:.. |..:..|||:.|  ..::....|.
plant   186 DAADFLACTLYESI---VFHLQLLDRQMKQTKSDDDGEKLELLSNISNVDYSS--TDLFRQGVLD 245

  Fly   160 YVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVHIEGLQMHVAST 224
            .:|:.|...:.|        ||::.|:..:|        ..::...|:...:..:.|..::|.:.
plant   246 CLNRALFQAETD--------FLRMVEQEMEE--------RPDLVSVGSCVLVTLLVGKDLYVLNL 294

  Fly   225 GDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEH---PKEEHETVIRNGRLLSQLAPL 286
            ||..|||...: ..::..:.:|..:|..||..|..|:|:||   ||     ::..|::..:|...
plant   295 GDSRAVLATYN-GNKKLQAVQLTEDHTVDNEVEEARLLSEHLDDPK-----IVIGGKIKGKLKVT 353

  Fly   287 RAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWD 351
            ||.|....|  :|.:...::.:..|:    |..:|||::..|.::.|::..:|.|:::|||||:|
plant   354 RALGVGYLK--KEKLNDALMGILRVR----NLLSPPYVSVEPSMRVHKITESDHFVIVASDGLFD 412

  Fly   352 FLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVDQNAATHLIRHAL 416
            |....|.:.||...::|.        |.||.     ::.|.||                |:..|.
plant   413 FFSNEEAIGLVHSFVSSN--------PSGDP-----AKFLLER----------------LVAKAA 448

  Fly   417 GGTDYGIEHSKISYYLT-LPRDAVRLYRDDITITVIYFNSE 456
            ....:.:|.      || :|....|.|.||:||.||...::
plant   449 ARAGFTLEE------LTNVPAGRRRRYHDDVTIMVITLGTD 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 84/343 (24%)
AT3G16560NP_001325978.1 PP2Cc 158..480 CDD:238083 98/390 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2815
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D461546at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2427
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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