DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and AT3G12620

DIOPT Version :10

Sequence 1:NP_572404.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_187868.2 Gene:AT3G12620 / 820442 AraportID:AT3G12620 Length:385 Species:Arabidopsis thaliana


Alignment Length:462 Identity:100/462 - (21%)
Similarity:181/462 - (39%) Gaps:147/462 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DAASYVRSNVREFSLNALRLLPQLPQLSPYDVNLVLRENEFVYNFPVDGVIRSYETNQLGSNWPC 72
            |:.::|..   |||::.::            .|.:|.::..:.:.||.                .
plant    41 DSGNHVAG---EFSMSVIQ------------ANNLLEDHSKLESGPVS----------------M 74

  Fly    73 EDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQ--MKQGADSQSF 135
            .||..:|:|:       |::|||.|....:.|:|.|...:      |:...|.  |.....:::|
plant    75 FDSGPQATFV-------GVYDGHGGPEAARFVNKHLFDNI------RKFTSENHGMSANVITKAF 126

  Fly   136 LKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTM 200
            |....   ||:|:::..::..           ||                               
plant   127 LATEE---DFLSLVRRQWQIK-----------PQ------------------------------- 146

  Fly   201 NVALSGAVACLVHI--EGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRILA 263
             :|..|| .|||.|  .|| :::|:.||...|||.|:...:...:.:|:.||||...|....:.:
plant   147 -IASVGA-CCLVGIICSGL-LYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRS 208

  Fly   264 EHPKEEHETVIRN--GRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTA 326
            .||.:....|:::  .|:...:...|:.|| .|....|..::.:|..|.|    |..:..|.|.|
plant   209 LHPNDPQIVVLKHKVWRVKGIIQVSRSIGD-AYLKKAEFNREPLLAKFRV----PEVFHKPILRA 268

  Fly   327 RPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVG---EHINSKKILEPMRLPEGDTTLQEIS 388
            .|.:..|::.|.|:||:.||||||:.|...|.|.:|.   .:..::|:::        |.|:|.:
plant   269 EPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIK--------TALREAA 325

  Fly   389 QQLAERKAGLTRKPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVIYF 453
            ::...|.:.|  |.:|:....|                               :.||||:.|::.
plant   326 KKREMRYSDL--KKIDRGVRRH-------------------------------FHDDITVIVVFL 357

  Fly   454 NSEHIAK 460
            :|..:::
plant   358 DSHLVSR 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_572404.1 PP2Cc 58..394 CDD:238083 80/344 (23%)
AT3G12620NP_187868.2 PP2Cc 50..357 CDD:238083 96/441 (22%)

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