DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and PLL3

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_187551.1 Gene:PLL3 / 820099 AraportID:AT3G09400 Length:650 Species:Arabidopsis thaliana


Alignment Length:554 Identity:119/554 - (21%)
Similarity:203/554 - (36%) Gaps:197/554 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKFVLNDAASYVRSNVR--------EFSLNALRLLPQLPQLSPYDVNLVLRENEFVYNFPVDGVI 58
            ||.|..:.:...:|.::        :.|.:..|.:|::..||.                    ::
plant   179 FKNVFTNLSCSKKSVIKPINGFDSFDGSSDTDRYIPEINSLST--------------------IV 223

  Fly    59 RSYETNQLGSNWPCEDSRTEASF----------------LH-----RNGFI-CGIFDGHAGAACG 101
            .|:|..::..    |:.:||::.                :|     .||:: .||:||.:|....
plant   224 SSHEKPRIKE----EEDKTESALEEPKIQWAQGKAGEDRVHVILSEENGWLFVGIYDGFSGPDPP 284

  Fly   102 QVVSKRLLRYVSAATLPRQVLRE-------------------------QMKQGADSQ-------- 133
            ..:.|.|  |.:       ||||                         .::..:||.        
plant   285 DYLIKNL--YTA-------VLRELKGLLWIDKGESYNRNGESNIEKQSTVEHASDSDQENCPVMN 340

  Fly   134 -SFLKCHNDNVDFVSMIKPM-------YEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQE 190
             :.:.|.:.|:  .|.:|.:       :.:|     |:......:||...|..|..:.:|...  
plant   341 GNDVACGSRNI--TSDVKKLQWRCEWEHNSS-----NKSNNINHKDVLRALQQALEKTEESFD-- 396

  Fly   191 ALTSNDVRTMNVALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKK---------- 245
             |..|:  ...:||.|:...:..::|..::|.|.||..||| ...|..::...:|          
plant   397 -LMVNE--NPELALMGSCVLVTLMKGEDVYVMSVGDSRAVL-ARRPNVEKMKMQKELERVKEESP 457

  Fly   246 ------------------LNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFG-D 291
                              ||.||:.....|||||..|||  :....|.|.|:...|...|||| .
plant   458 LETLFITERGLSLLVPVQLNKEHSTSVEEEVRRIKKEHP--DDILAIENNRVKGYLKVTRAFGAG 520

  Fly   292 F--RYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLP 354
            |  :.||::.:::     ||.:..:.    |.||:|..|.:..|.|...||||:::||||:::..
plant   521 FLKQPKWNEALLE-----MFRIDYVG----TSPYITCSPSLHHHRLSSRDKFLILSSDGLYEYFS 576

  Fly   355 PSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVDQNAATHLIRHAL--G 417
            ..|.:..|...|::        .||||                         .|.|||:..|  .
plant   577 NEEAIFEVDSFISA--------FPEGD-------------------------PAQHLIQEVLLRA 608

  Fly   418 GTDYGIEHSKISYYLTLPRDAVRLYRDDITITVI 451
            ...||::..::   |.:|:...|.|.||:::.||
plant   609 AKKYGMDFHEL---LEIPQGDRRRYHDDVSVIVI 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 95/429 (22%)
PLL3NP_187551.1 PP2Cc 253..641 CDD:238083 105/456 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2815
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D461546at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2427
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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