DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and PLL4

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_180455.1 Gene:PLL4 / 817438 AraportID:AT2G28890 Length:654 Species:Arabidopsis thaliana


Alignment Length:482 Identity:109/482 - (22%)
Similarity:177/482 - (36%) Gaps:151/482 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NFPVDGVIR----SYETNQLGSNW---PCEDSRTEASFLHRNGFI-CGIFDGHAGAACGQVVSKR 107
            ||..:|.:.    |.|:..|  .|   ...:.|........:|:: .||:||..|......:...
plant   232 NFSSEGSLLDDDVSLESQNL--QWAQGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSH 294

  Fly   108 LLRYVSAATLPRQVLREQMKQGA-----------------------DSQSFLKCHNDNVDFVSMI 149
            |  |.:.....:.:|.:..|..|                       :||...:|..|. |...::
plant   295 L--YPAVHRELKGLLWDDPKTDAKSSDEADVENRDSSSEKKSKNWEESQRRWRCEWDR-DLDRLL 356

  Fly   150 KPM----------YEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVAL 204
            |..          ..:..||.::|.|   ::...:.|.||.:.|||             ...:||
plant   357 KDRSNGLDLDPDPNSSDVLKALSQAL---RKTEEAYLENADMMLDE-------------NPELAL 405

  Fly   205 SGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSK------------------------- 244
            .|:...::.::|..:::.:.||..|||| ...::..|..|                         
plant   406 MGSCVLVMLMKGEDVYLMNVGDSRAVLG-QKAESDYWIGKIKQDLERINEETMNDFDGCGDGEGA 469

  Fly   245 ---------KLNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFG-DF--RYKWS 297
                     :|.::|:.:...||.||..|||  :..:.:.|.|:...|...|||| .|  :.||:
plant   470 SLVPTLSAFQLTVDHSTNVEEEVNRIRKEHP--DDASAVSNERVKGSLKVTRAFGAGFLKQPKWN 532

  Fly   298 QEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLV 362
            ..:::     ||.:....    |.||:...|.:..|.||..|:||:::||||:.:....|.||.|
plant   533 NALLE-----MFQIDYKG----TSPYINCLPSLYHHRLGSKDQFLILSSDGLYQYFTNEEAVSEV 588

  Fly   363 GEHINSKKILEPMRLPEGDTTLQEISQQL---AERKAGLTRKPVDQNAATHLIRHALGGTDYGIE 424
            ...|..:        ||||.. |.:.|:|   |.:|||:.             .|.|        
plant   589 ELFITLQ--------PEGDPA-QHLVQELLFRAAKKAGMD-------------FHEL-------- 623

  Fly   425 HSKISYYLTLPRDAVRLYRDDITITVI 451
                   |.:|:...|.|.||::|.||
plant   624 -------LEIPQGERRRYHDDVSIVVI 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 92/416 (22%)
PLL4NP_180455.1 PP2Cc 257..645 CDD:238083 102/455 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D461546at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2427
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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