DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm1nb

DIOPT Version :10

Sequence 1:NP_572404.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001096587.1 Gene:ppm1nb / 564875 ZFINID:ZDB-GENE-071004-34 Length:435 Species:Danio rerio


Alignment Length:338 Identity:77/338 - (22%)
Similarity:115/338 - (34%) Gaps:123/338 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QLG---SNWPCEDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQM 126
            |||   |:|        |.|        .:||||||:|..|..|:.||.::....          
Zfish   100 QLGGELSHW--------AFF--------AVFDGHAGSAVAQNCSRNLLDHILGTG---------- 138

  Fly   127 KQGADSQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEA 191
            |..||                                  |..:| |:......|..:|:.:...|
Zfish   139 KIRAD----------------------------------EDVER-VTEGFKEGFFLMDKHLHAMA 168

  Fly   192 LTSNDVRTMNVALSGAVACLVHIEGLQMHVASTGDCGAVL---GVLDPQTQQWHSKKLNIEHNAD 253
            ......|.....:|.|:.  .|    .::..:.||..|||   |.:...|:         :|...
Zfish   169 CREGWERGGTTVVSTAIT--PH----HIYFVNCGDSRAVLCRAGRVAFSTE---------DHKPF 218

  Fly   254 NMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYK---WSQEIMQQKVLPMFGVQAMA 315
            :..|..||      |.....:...|:...||..||.|||.||   | :.:.:|.|.|        
Zfish   219 SPGEKERI------ESAGGSVTLQRVNGSLAVSRALGDFSYKTVEW-RSVTEQMVSP-------- 268

  Fly   316 PNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEG 380
                       .|:|...|..|.|:|||:|.||:||.:...|:.:.|...:   :|.        
Zfish   269 -----------EPEVSVVERSPADEFLVLACDGVWDTVSNEELCAFVHSRL---RIC-------- 311

  Fly   381 DTTLQEISQQLAE 393
             |.|:|:..|:.:
Zfish   312 -TDLREVCSQVID 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_572404.1 PP2Cc 58..394 CDD:238083 77/338 (23%)
ppm1nbNP_001096587.1 PP2Cc 79..341 CDD:238083 77/338 (23%)
PP2C_C 335..415 CDD:429684
Blue background indicates that the domain is not in the aligned region.

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