DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and si:ch211-15p9.2

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001038455.2 Gene:si:ch211-15p9.2 / 562650 ZFINID:ZDB-GENE-060503-577 Length:505 Species:Danio rerio


Alignment Length:484 Identity:178/484 - (36%)
Similarity:268/484 - (55%) Gaps:71/484 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VRSNVREFSLNALRLLPQLPQLSPYDVNLVLRENEF-----VYNFPVDGVIRSYETNQLGSNWPC 72
            ::::.|::|:.|       .|:|...:|..|:.:|:     .||    |.::.:::|.|.||.|.
Zfish    50 IKNSRRKYSVKA-------NQMSLSQINHTLKASEYSLKVNAYN----GCVKGFDSNILPSNSPS 103

  Fly    73 EDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQ---- 133
            ||.|:.|:.|...|.:.|:||||||:||.|.||:||..|::.:.||.:.|.| ::...:|:    
Zfish   104 EDRRSAATCLQSRGMLFGVFDGHAGSACAQAVSERLFYYIALSLLPLRTLME-IEAAVESERPVL 167

  Fly   134 SFLKCHNDNVDFVSMIK-PMYEASFLKYVNQ---LLETPQRDVSSELVNAFLQLDEEISQEALTS 194
            ..|:.|....|:.|... .:|.:|...|..:   |.|....|......|||.:||.:||.||...
Zfish   168 PVLQWHKHPNDYQSTDSGKLYFSSLRTYWQERIDLQENEDCDTQGAFRNAFKRLDNDISLEAQVD 232

  Fly   195 NDV-----RTMNVALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQ----WHSKKLNIEH 250
            ..|     ..:.|||||..||:.:::...:::|:.||..|||||     ||    |.:..:..:|
Zfish   233 IGVPLAHFTPLRVALSGCTACVAYVDQDDLYIANLGDSRAVLGV-----QQGDGKWSAFTITNDH 292

  Fly   251 NADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQ------------ 303
            ||.|.:|::|:|:|||..|.:||:::.|||..|.|.|||||.::|||.|::.:            
Zfish   293 NAQNPNEMKRVLSEHPACEQKTVVKHDRLLGLLIPFRAFGDMKFKWSSELLNRIYEARPELLIGN 357

  Fly   304 ---KVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEH 365
               |:||        .||:|||||||.|::..|:|.|.||||::.:||||:.:....||.::|||
Zfish   358 ENAKMLP--------ANYHTPPYLTAEPEITYHKLRPQDKFLILGTDGLWELMHRQTVVQVIGEH 414

  Fly   366 INS---KKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVDQNAATHLIRHALGGTDYG-IEHS 426
            ::.   ||.:..|..     |:.::.:.|.|||........|:|:||||||||||....| |||.
Zfish   415 LSGIEWKKPVSGMYF-----TVGQMHRLLRERKRRALSAREDENSATHLIRHALGSDGSGTIEHD 474

  Fly   427 KISYYLTLPRDAVRLYRDDITITVIYFNS 455
            :|:..|.||:|..|:|||||||.||:|||
Zfish   475 RIAKMLCLPQDLARMYRDDITIIVIHFNS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 130/370 (35%)
si:ch211-15p9.2NP_001038455.2 PP2Cc 89..501 CDD:238083 164/430 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577955
Domainoid 1 1.000 167 1.000 Domainoid score I3809
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2509
OMA 1 1.010 - - QHG52867
OrthoDB 1 1.010 - - D186269at33208
OrthoFinder 1 1.000 - - FOG0002436
OrthoInspector 1 1.000 - - otm25362
orthoMCL 1 0.900 - - OOG6_101170
Panther 1 1.100 - - O PTHR13832
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X558
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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