DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm1la

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001071068.1 Gene:ppm1la / 556994 ZFINID:ZDB-GENE-061103-118 Length:361 Species:Danio rerio


Alignment Length:381 Identity:83/381 - (21%)
Similarity:127/381 - (33%) Gaps:153/381 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIKPM 152
            |..|||||.|......|.         |.|| :.|::|:      |:|.:...|:        |:
Zfish   123 IFAIFDGHGGEGAADYVK---------AHLP-EALKQQL------QAFEREKKDS--------PL 163

  Fly   153 YEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVH-IEG 216
            ...|.|:         ||         .|.:|.::.::...|:|        .....||:. :..
Zfish   164 SYPSILE---------QR---------ILAVDRDMVEKFSASHD--------EAGTTCLIALLSD 202

  Fly   217 LQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETVIRNG--RL 279
            .::.||:.||...||...|     .::..|:.:|....:.|.:||     |.....:..||  |:
Zfish   203 RELTVANVGDSRGVLCDKD-----GNAVALSHDHKPYQLKERKRI-----KRAGGFISFNGSWRV 257

  Fly   280 LSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVI 344
            ...||..|:.||:              |:..:..:.|:   |..||...|..|.|      |:::
Zfish   258 QGILAMSRSLGDY--------------PLKNLNVVIPD---PDILTFDLDKLQPE------FMIL 299

  Fly   345 ASDGLWDFLPPSEVVSLVGE-----HINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPVD 404
            |||||||.....|.|..|.|     |..:|.|:           ||                   
Zfish   300 ASDGLWDAFSNEEAVRFVRERLDEPHFGAKSIV-----------LQ------------------- 334

  Fly   405 QNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVIYFNSEHIAK 460
                                    |:|...|        |:||:.|:.|.|...:|
Zfish   335 ------------------------SFYRGCP--------DNITVMVVKFKSSSASK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 73/313 (23%)
ppm1laNP_001071068.1 PP2Cc 93..351 CDD:238083 80/372 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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