DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm1j

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_684981.2 Gene:ppm1j / 556950 ZFINID:ZDB-GENE-091230-9 Length:496 Species:Danio rerio


Alignment Length:445 Identity:94/445 - (21%)
Similarity:156/445 - (35%) Gaps:175/445 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHN---------DNVDF 145
            |:||||||:....:.||.|.|          ::|:::   .|....|:.||         :...|
Zfish   135 GVFDGHAGSGAALMASKLLQR----------IIRDRL---CDVAHLLENHNSPPPICLAKNGSPF 186

  Fly   146 VSMIKPMYEASFLKYVNQ---LLETP----QRDVSSE------LVNAFLQLDEEISQEALTSNDV 197
            .:..|   :.:.|....|   |.:.|    ::|:|.|      :..||.|:|:.|.:|       
Zfish   187 QAEGK---KGACLDGEEQDAGLPDEPRFHMEKDISVESLVMGIIETAFRQMDDLIEKE------- 241

  Fly   198 RTMNVALSGAVACLV--HIEGLQMHVASTGDCGAV-------------------------LGVLD 235
             ..:.::||....||  |:.| :::||:.||..|:                         ||.|.
Zfish   242 -KESYSISGGCCALVAIHLMG-KLYVANAGDSRAIIVRNSEVIPMSTEFTPESERQRLQYLGFLK 304

  Fly   236 P----------------QTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETVI---------- 274
            |                |.::...|.|..:|.....:             ::|:|          
Zfish   305 PELLGNEFTHIEFPRRIQHKELGKKMLFRDHTMTGWA-------------YKTIIEDDLKFPLIY 356

  Fly   275 ---RNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQ----- 331
               :..|:::.:...|..||...|                 ....|.|..|:|:..|:|:     
Zfish   357 GEGKKARVMATIGVTRGLGDHDLK-----------------VYNSNIYIKPFLSCCPEVKVYNIS 404

  Fly   332 QHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKA 396
            :|:.| :|..||:.||||||.....:|...|...::|::..:|:|.     ||  .:|.|..|..
Zfish   405 EHKHG-SDDVLVMGSDGLWDVTADRDVADAVSTFLSSREPNDPLRY-----TL--AAQDLLMRSR 461

  Fly   397 GLTRKPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVI 451
            |:.::     ....|....||.                        .||||:.||
Zfish   462 GVLKE-----RGWRLPNERLGS------------------------GDDITVFVI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 83/386 (22%)
ppm1jXP_684981.2 PP2Cc 130..489 CDD:238083 94/445 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577958
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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