DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and Ppm1d

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_058606.3 Gene:Ppm1d / 53892 MGIID:1858214 Length:598 Species:Mus musculus


Alignment Length:358 Identity:81/358 - (22%)
Similarity:131/358 - (36%) Gaps:116/358 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CEDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVS-----AATLPRQVLREQMKQGAD 131
            |...|:..:|.       .:.|||.|....|...:.|..::.     .::.|.:|.      .|.
Mouse    84 CCRRRSSVAFF-------AVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVC------AAI 135

  Fly   132 SQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSND 196
            .:.||.||      ::|.|            :|.|.|                            
Mouse   136 RKGFLACH------LAMWK------------KLAEWP---------------------------- 154

  Fly   197 VRTMN--VALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDP---------QTQQWHSKKLNIEH 250
             :||.  .:.||..|.:|.|.|::|:||..||.|.|||:.|.         :..|.|..:|..|.
Mouse   155 -KTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKER 218

  Fly   251 --------NADNMSEVRRILAEHPKEEHETVIRNGRLLSQ---LAPLRAFGDFRYKWSQEIMQQK 304
                    :..|.|.|.|::.:.|:..|...:|...::.|   ||..||.||.   ||.:....|
Mouse   219 ERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDL---WSYDFFSGK 280

  Fly   305 VLPMFGVQAMAPNYYTPPYLTARPDVQQHELGP-NDKFLVIASDGLWDFLPPSEVVSLVGEHINS 368
            .:                 ::..||...|.|.| ..|::::.|||||:.:||.:.:|:..:....
Mouse   281 FV-----------------VSPEPDTSVHTLDPRKHKYIILGSDGLWNMVPPQDAISMCQDQEEK 328

  Fly   369 KKILEPMRLPEGDTTLQEISQQLAERKAGLTRK 401
            |.::       |:.. |..::.|..|..|..|:
Mouse   329 KYLM-------GEQG-QSCAKMLVNRALGRWRQ 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 78/349 (22%)
Ppm1dNP_058606.3 Interaction with CHEK1. /evidence=ECO:0000250 1..94 2/9 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..74
PP2C 84..361 CDD:278884 81/358 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..419
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..584
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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