DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm1db

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001007341.1 Gene:ppm1db / 492468 ZFINID:ZDB-GENE-041114-27 Length:534 Species:Danio rerio


Alignment Length:338 Identity:72/338 - (21%)
Similarity:115/338 - (34%) Gaps:122/338 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TNQLGSNWPCEDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMK 127
            |::.|:.....|||...:|.       .:||||.|.              .||...|..|.:.:|
Zfish    86 TDEPGTQPAAADSRRSVAFF-------AVFDGHGGR--------------EAAMFARDHLWDFLK 129

  Fly   128 Q-------------GADSQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNA 179
            :             .|..:.|:.||:      :|.|.:.|     :...|...|           
Zfish   130 KQRGFWSKDYRKVCSAIRKGFIACHH------AMWKKLPE-----WPKTLTGLP----------- 172

  Fly   180 FLQLDEEISQEALTSNDVRTMNVALSGAVACLVHIEGLQMHVASTGDCGAVLGVL-DPQTQQWHS 243
                                   :.||..|.:|.|.|..|.||..||...||||. ||..:...:
Zfish   173 -----------------------STSGTTASVVVIRGDHMFVAHVGDSSVVLGVREDPSDKVIKA 214

  Fly   244 KKLNIEHNAD----------------NMSEVRRILAEHPKEEHETVIRNGRLLSQ---LAPLRAF 289
            .::..:|..:                ..|.|.|::.:.|:..|...:|....:.|   ||..||.
Zfish   215 VEVTQDHKPELPKEKQRIEGLGGSVVKKSGVNRVVWKRPRLSHNGPVRRSTPIDQIPFLAVARAL 279

  Fly   290 GDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTA-RPDVQQHELGP-NDKFLVIASDGLWDF 352
            ||.   ||.:                  :|:..::.: .||.....|.| ..:::::.|.|||:.
Zfish   280 GDL---WSYD------------------FYSGEFVVSPEPDTSVVTLDPRRHRYIIVGSGGLWNM 323

  Fly   353 LPPSEVVSLVGEH 365
            :||.|.|::...|
Zfish   324 VPPQEAVTVCQSH 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 72/338 (21%)
ppm1dbNP_001007341.1 PP2Cc 101..376 CDD:238083 67/323 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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