DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp and tab1

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_002662286.4 Gene:tab1 / 403084 ZFINID:ZDB-GENE-060628-1 Length:491 Species:Danio rerio


Alignment Length:431 Identity:93/431 - (21%)
Similarity:159/431 - (36%) Gaps:110/431 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PCEDSR----TEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQG-- 129
            |.||..    ||:.||:      |:|:|..|:.....|.:         .|..::|..|:..|  
Zfish    38 PNEDGHFRFSTESCFLY------GVFNGFEGSRVASFVCQ---------CLTAELLLGQLSSGDT 87

  Fly   130 -ADSQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALT 193
             ||.:..|....|.|          |.|:.:.::        |..:|..|...||.|.....|.|
Zfish    88 DADVRRILTQAFDVV----------EKSYFETID--------DALAEKANLQTQLPEGAYVSAQT 134

  Fly   194 SN---DVRTMNVALS-GAVACLVHIEGLQMHVASTGDCGAVL--GVLDPQTQQWHSKKLNIEHNA 252
            .|   .::|:...:: ||.|.:..|...::::|:.|...|:|  ...|.|.|   ..::...|..
Zfish   135 HNIADRLKTLEQEVTRGATAIVALILKNKLYIANVGTNRALLCKTTSDGQNQ---VIQIGRAHTT 196

  Fly   253 DNMSEVRRI--LAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMA 315
            ||..|:.|:  |...|....:|.:.:|:     :..|..||::.|::..          .:..::
Zfish   197 DNEDELTRLAQLGLDPVRLRQTAVISGQ-----SSTRRIGDYKVKFNYT----------DIDVLS 246

  Fly   316 PNYYTPPYLTARPDVQ-QHELGPNDKFLVIASDGLWDFLPPS--------EVVSLVGEHINSKKI 371
            ...:.|  :.|.|::. ...|.....||::.|:||...|..:        |||::|...:..:  
Zfish   247 AAKHKP--IIAEPEIHGGQSLAGVTGFLLLMSEGLIKALEAAHGPEQVNQEVVAMVAAELAQQ-- 307

  Fly   372 LEPMRLPEGDTTLQEISQQLAERKAGLTRKPV--DQNAATHLIRHALGGTDYGIEHSKISYYLT- 433
                      .:|:..:|.:.||...|.....  .:..|.|...|    .|..:....|:|.|. 
Zfish   308 ----------GSLEAAAQAVVERVKRLHHDVFVSGRQRAQHCAHH----EDMTLLIRVINYTLAD 358

  Fly   434 ---LPRDAVRLYRDDITITVIYFNSEHIAKLHSDVDQTEVT 471
               .|....|:|    .::|.|.|       |....:|.||
Zfish   359 GSLTPTQGGRIY----PVSVPYSN-------HQSTSKTSVT 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 73/346 (21%)
tab1XP_002662286.4 PP2Cc 26..327 CDD:238083 76/353 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577961
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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