DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm1da

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_957384.2 Gene:ppm1da / 394065 ZFINID:ZDB-GENE-040426-815 Length:535 Species:Danio rerio


Alignment Length:312 Identity:68/312 - (21%)
Similarity:114/312 - (36%) Gaps:111/312 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQ-------------GADSQSFLKCHNDN 142
            :||||.|.              .||...|..|.:.:|:             .|..:.|:.||:  
Zfish   103 VFDGHGGP--------------DAARFARDHLWDHIKKQRGFWSEDDDEVCAALRKGFITCHH-- 151

  Fly   143 VDFVSMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGA 207
                :|.|.:.|  :.|.|..|..|                                     ||.
Zfish   152 ----AMWKKLPE--WPKTVTGLPST-------------------------------------SGT 173

  Fly   208 VACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQW-HSKKLNIEHNAD----------------NM 255
            .|.:|.:...:|:||..||...||||.|..:::: .:.::..:|..|                ..
Zfish   174 TASIVVLRRDRMYVAHVGDSAVVLGVQDHPSEEFIRAVEITQDHKPDLPKERERIEGLGGSVIKK 238

  Fly   256 SEVRRILAEHPKEEHETVIRNGRLLSQ---LAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPN 317
            |.|.|::.:.|:..|...:|...::.|   ||..||.||.   ||.:...       |...::|.
Zfish   239 SGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDL---WSYDFYS-------GEFVVSPE 293

  Fly   318 YYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSK 369
               |.....:.|::||      :::::.|||||:.:.|.|.||:..::..:|
Zfish   294 ---PDTAVIKLDLKQH------RYIILGSDGLWNMVSPQEAVSICQDNDEAK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 68/312 (22%)
ppm1daNP_957384.2 PP2Cc 98..375 CDD:238083 68/312 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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