DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp and CG7115

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001260216.1 Gene:CG7115 / 34069 FlyBaseID:FBgn0027515 Length:524 Species:Drosophila melanogaster


Alignment Length:475 Identity:104/475 - (21%)
Similarity:162/475 - (34%) Gaps:185/475 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SPY--------DVNLVLRENEFVYNFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHRNGFICGI 91
            |||        |.|   :||    ..|..||:|             :||..:|            
  Fly   188 SPYLARKQSRKDAN---KEN----TEPTAGVMR-------------KDSLRKA------------ 220

  Fly    92 FDGHAGAA-CGQVVSKRLLRYVSAATLPRQVLREQMKQ----GADSQSFLKCHNDNVD-FVSMIK 150
               |:..| |..:  |:.....|.|.:....|...|:.    ||...|||..:|:..: ..:...
  Fly   221 ---HSTTADCSAI--KQKTTEASIADIYTVQLNSAMRASGNLGAAKDSFLNNNNNGQNGAANAPP 280

  Fly   151 PMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVHIE 215
            |.|||..  |:........:.::.|:::|..:|.|:..         |..|:|  |..|.:..::
  Fly   281 PNYEAKC--YIEHGRINFGKLITDEIMSADYKLVEQAK---------RATNIA--GTTALIAIVQ 332

  Fly   216 GLQMHVASTGDCGAVL----GVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHET---V 273
            |.::.||:.||...|:    |:..|         |:.:|....:.|.:||        |:.   :
  Fly   333 GSKLIVANVGDSRGVMYDWRGIAIP---------LSFDHKPQQVRERKRI--------HDAGGFI 380

  Fly   274 IRNG--RLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELG 336
            ...|  |:...||..||.||:..|....::                        |.||:...|| 
  Fly   381 AFRGVWRVAGVLATSRALGDYPLKDKNLVI------------------------ATPDILTFEL- 420

  Fly   337 PND---KFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGL 398
             ||   .||::|||||||.....|..:...||:.     ||                        
  Fly   421 -NDHKPHFLILASDGLWDTFSNEEACTFALEHLK-----EP------------------------ 455

  Fly   399 TRKPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITVIYFNSEHIAKLHS 463
                                 |:|.:...:..|   .|.:|    |:||:.||.|.:: :.|:.|
  Fly   456 ---------------------DFGAKSLAMESY---KRGSV----DNITVLVIVFKND-VYKIGS 491

  Fly   464 DV-----DQTEVTA---PVA 475
            ..     :..:|.|   |||
  Fly   492 SAGKAGEESLKVPAKSQPVA 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 76/353 (22%)
CG7115NP_001260216.1 PP2Cc 111..482 CDD:238083 96/443 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445105
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13832
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.