DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdp and Tab1

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001103446.1 Gene:Tab1 / 315139 RGDID:1306216 Length:502 Species:Rattus norvegicus


Alignment Length:477 Identity:102/477 - (21%)
Similarity:170/477 - (35%) Gaps:171/477 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RSYETNQLGS-NWPCEDS----RTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLP 118
            |||..:..|: :.|.||:    |:|     .|.|:.|:|:|:.|......|::||    ||..|.
  Rat    35 RSYSADGKGTESHPPEDNWLKFRSE-----NNCFLYGVFNGYDGNRVTNFVAQRL----SAELLL 90

  Fly   119 RQV--------LREQMKQGAD--SQSFLKCHNDNVDFVSMIKPMYEASFLKYVNQLLETPQRDVS 173
            .|:        :|..:.|..|  .:|||    :::|.....|...::...:.|.|....||....
  Rat    91 GQLNTEHTDADVRRVLLQAFDVVERSFL----ESIDDALAEKASLQSQLPEGVPQHQLLPQYQKI 151

  Fly   174 SELVNAFLQLDEEISQEA------LTSNDVRTMNVALSGAVACLVHIEGLQMHVASTGDCGAVLG 232
            .|.:.|   |::|||..|      |.:|.:...||..:.|:.|...::|||:             
  Rat   152 LERLKA---LEKEISGGAMAVVAVLLNNKLYVANVGTNRALLCRSTVDGLQV------------- 200

  Fly   233 VLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQLA------------- 284
                 ||      ||::|.|:|..|:.|                   ||||.             
  Rat   201 -----TQ------LNVDHTAENEDELFR-------------------LSQLGLDAGKIKQVGVIC 235

  Fly   285 ---PLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPND---KFLV 343
               ..|..||::.|:...          .:..::.....|  :.|.|::  |...|.|   .|||
  Rat   236 GQESTRRIGDYKVKYGYT----------DIDLLSTAKSKP--IIAEPEI--HGAQPLDGVTGFLV 286

  Fly   344 IASDGLWDFLPPS--------EVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTR 400
            :.|:||:..|..:        ||.:::......:            |:|..::|.:         
  Rat   287 LMSEGLYKALEAAHGPGQANQEVAAMIDTEFAKQ------------TSLDAVAQAV--------- 330

  Fly   401 KPVDQNAATHLIRHALGG----------------TDYGIEHSKISYYLTLPRDAVRLYRDDITIT 449
              ||:....|....|.||                .::|....::|.....|....|:|    .::
  Rat   331 --VDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGEMSQPTPTPAPGGRVY----PVS 389

  Fly   450 VIYFNSEHIAKLHSDVDQTEVT 471
            |.|.:::..:|       |.||
  Rat   390 VPYSSAQSTSK-------TSVT 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 85/382 (22%)
Tab1NP_001103446.1 PP2C 69..334 CDD:278884 74/355 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338465
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.