DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and Ppm1k

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001101333.1 Gene:Ppm1k / 312381 RGDID:1308501 Length:372 Species:Rattus norvegicus


Alignment Length:311 Identity:66/311 - (21%)
Similarity:102/311 - (32%) Gaps:117/311 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIKPMYEA 155
            ::|||.|.|....                                  ||......|:.:.|.   
  Rat   125 VYDGHGGPAAADF----------------------------------CHTHMEKCVTDLLPR--- 152

  Fly   156 SFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTMNVALSGAVACLVHIEGLQMH 220
                         ::|:.:.|..|||::|:..|..|..|.|...:....:..||.|  .:|:::.
  Rat   153 -------------EKDLETVLTLAFLEIDKAFSSYAHLSADASLLTSGTTATVALL--RDGVELV 202

  Fly   221 VASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRI------LAEHPKEEHETVIRNGRL 279
            |||.||..|:|      .::....||..:|..:...|..||      :|.:...:...   ||| 
  Rat   203 VASVGDSRALL------CRKGKPMKLTTDHTPERKDEKERIKKCGGFVAWNSLGQPHV---NGR- 257

  Fly   280 LSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHEL-GPNDKFLV 343
               ||..|:.||...|.|..|                         |.|:..:.:| ..:|.|||
  Rat   258 ---LAMTRSIGDLDLKASGVI-------------------------AEPETTRIKLYHADDSFLV 294

  Fly   344 IASDG---------LWDFL----PPSEVVSLV-------GEHINSKKILEP 374
            :.:||         :.||:    .|.|....|       |...||..::.|
  Rat   295 LTTDGINFMVNSQEICDFVNQCHDPKEAAHAVTEQAIQYGTEDNSTAVVVP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 66/311 (21%)
Ppm1kNP_001101333.1 PP2Cc 95..346 CDD:238083 66/311 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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