DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and Ppm1a

DIOPT Version :10

Sequence 1:NP_572404.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_038967714.2 Gene:Ppm1a / 24666 RGDID:3373 Length:472 Species:Rattus norvegicus


Alignment Length:331 Identity:71/331 - (21%)
Similarity:115/331 - (34%) Gaps:100/331 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EDSRTEA----SFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQ 133
            ||:.|..    |.|....|. .::|||||:...:...:.||.:::                    
  Rat   127 EDAHTAVIGLPSGLETWSFF-AVYDGHAGSQVAKYCCEHLLDHIT-------------------- 170

  Fly   134 SFLKCHNDNVDFV-SMIKPMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDV 197
                   :|.||. |...|..|                :|.:.:...||::||.          :
  Rat   171 -------NNQDFKGSAGAPSVE----------------NVKNGIRTGFLEIDEH----------M 202

  Fly   198 RTMN-----VALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNI---EHNADN 254
            |.|:     ...||:.|..|.|.....:..:.||...:|         ..::|::.   :|...|
  Rat   203 RVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL---------CRNRKVHFFTQDHKPSN 258

  Fly   255 MSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYY 319
            ..|..||      :.....:...|:...||..||.|||.||.              |....|   
  Rat   259 PLEKERI------QNAGGSVMIQRVNGSLAVSRALGDFDYKC--------------VHGKGP--- 300

  Fly   320 TPPYLTARPDVQQHELG-PNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTT 383
            |...::..|:|...|.. .:|:|:::|.||:||.:...|:...|...:.....||.:.....||.
  Rat   301 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTC 365

  Fly   384 LQEISQ 389
            |.:.|:
  Rat   366 LYKGSR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_572404.1 PP2Cc 58..394 CDD:238083 71/331 (21%)
Ppm1aXP_038967714.2 None

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