DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and Ppm1n

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_006539883.1 Gene:Ppm1n / 232941 MGIID:2142330 Length:452 Species:Mus musculus


Alignment Length:314 Identity:74/314 - (23%)
Similarity:105/314 - (33%) Gaps:123/314 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIKPMYEA 155
            :.|||.||...:..::.|..||                                           
Mouse    94 VLDGHGGARAARFGARHLPGYV------------------------------------------- 115

  Fly   156 SFLKYVNQLLETPQR--DVSSELVNAFLQLDEEISQEALTSNDVRTMNVAL--------SGAVAC 210
                 :.:|...||.  .|...|.:||||.|.::|              ||        |.|||.
Mouse   116 -----LGELGPAPQEPDGVRQALRSAFLQADAQLS--------------ALWPRGDPGGSTAVAL 161

  Fly   211 LVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNI-----EHNADNMSEVRRILAEHPKEEH 270
            ||....|  ::|..||..|:|           |:..::     :|......|..||        |
Mouse   162 LVSPRFL--YLAHCGDSRALL-----------SRSGSVAFCTEDHRPHRPRERERI--------H 205

  Fly   271 ET--VIRNGRLLSQLAPLRAFGDFRYKWSQEIMQQKVLPMFGVQAMAPNYYTPPYL---TARPDV 330
            :.  .:|..|:...||..||.|||.||                  .||.  .||.|   :|.|:|
Mouse   206 DAGGTVRRRRVEGSLAVSRALGDFAYK------------------QAPG--RPPELQLVSAEPEV 250

  Fly   331 QQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTL 384
            ........|:|:::||||:||.|..:::..||...:.....||.:.....||.|
Mouse   251 AALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 74/314 (24%)
Ppm1nXP_006539883.1 PP2Cc 59..319 CDD:238083 74/314 (24%)
PP2C_C 313..387 CDD:369544
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834877
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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