DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and ppm-1.D

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_497539.3 Gene:ppm-1.D / 190269 WormBaseID:WBGene00021856 Length:766 Species:Caenorhabditis elegans


Alignment Length:399 Identity:72/399 - (18%)
Similarity:141/399 - (35%) Gaps:131/399 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 NGFI----CGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDF 145
            ||.:    .|:||||.|....:.|.:.||..::.                               
 Worm    46 NGLLDWTFVGVFDGHGGEHASEYVRRHLLMNITK------------------------------- 79

  Fly   146 VSMIKPMYEASFLKYVNQLLET-PQRDVSSELVNAFLQLDEEI----SQEALTSNDVRTMNVALS 205
                            ||..|: ...|:...:...||...|::    .:...|::..    .:.:
 Worm    80 ----------------NQKFESNSDEDILEAIRQGFLMTHEQMRHVYDEWPYTASGY----PSTA 124

  Fly   206 GAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEH 270
            |.....|.|...:::....||....||.:  :..:.||:.|..:|..:::.|..||    .|...
 Worm   125 GTTVSCVFIRNGKLYTGHVGDSAIFLGTV--ENGELHSRPLTTDHKPESVHEQLRI----AKAGG 183

  Fly   271 ETVIRNG---------RLLSQLAPLRA-FGDFRYKWSQEIMQQKVLPMFGV-----QAMAPNYYT 320
            ||.:::|         :.:||...:.: ..:.::..:.:||:.  :|...|     ...:.|..|
 Worm   184 ETAVKSGVTRVVWKRPQKMSQFMMMTSNSNEQKHHQNPQIMEN--IPFLSVARSLGDLWSYNEKT 246

  Fly   321 PPYLTA-RPDVQQHELGPNDKFLVIASDGLWDFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTL 384
            ..::.: .||:..|.|..||..||:||||:.:.:...:.:|:|.:                :..:
 Worm   247 NMFIVSPEPDLGVHRLTGNDFCLVLASDGMTNVMTGDQAISIVFK----------------EEEM 295

  Fly   385 QEISQQLAERKAGLTRKPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITIT 449
            .||.::            :::|.:..::|.||                   :....|..|::||.
 Worm   296 VEIHEE------------INRNHSRCVLRSAL-------------------QKWRSLRADNVTIA 329

  Fly   450 VIYFNSEHI 458
            .:.|:.|.|
 Worm   330 TVIFDIEPI 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 61/333 (18%)
ppm-1.DNP_497539.3 PP2Cc 19..333 CDD:238083 69/392 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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