DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdp and pdp2

DIOPT Version :9

Sequence 1:NP_001245567.1 Gene:Pdp / 31683 FlyBaseID:FBgn0029958 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_002942040.2 Gene:pdp2 / 100489227 XenbaseID:XB-GENE-480918 Length:536 Species:Xenopus tropicalis


Alignment Length:502 Identity:195/502 - (38%)
Similarity:280/502 - (55%) Gaps:80/502 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VREFSLNALRLLPQLPQ-------LSPYDVNLVLRENEFVYNFPV--DG----VIRSYETNQLGS 68
            |.|.|:::.|...|...       |:|..:|.:||.||..|. |:  ||    .:..:|:|||.|
 Frog    57 VHEISVSSERSFRQTSSENDVQFLLNPTQINYILRANELSYK-PIEFDGKNPSTVLKFESNQLAS 120

  Fly    69 NWPCEDSRTEASFLHRNGFICGIFDGHAGAACGQVVSKRLLRYVSAATLPRQVLREQMKQGADSQ 133
            |.||||.|:.|:.|..||.:.|:||||||:||.|.||:||..|::.:.:.::.|           
 Frog   121 NTPCEDRRSAATCLQTNGHLFGVFDGHAGSACAQSVSERLFYYIAVSLMSQKTL----------- 174

  Fly   134 SFLKCHNDNVDFVS-MIKPMYE-ASFLKYVNQLLETPQRDVSS-----------ELVN------- 178
                   ::::|.| .:|||.. ..:.|:.|..|   .|:|:|           ||:|       
 Frog   175 -------EDIEFASEHLKPMLPILQWHKHKNDHL---YREVASLYVDHLRVYWQELINLDNESGM 229

  Fly   179 --------AFLQLDEEISQEAL--TSNDV---RTMNVALSGAVACLVHIEGLQMHVASTGDCGAV 230
                    ||.:||.:||.||.  |:|:.   .|:.||.|||.||:.||:|:.:|:|::|||.|:
 Frog   230 SLEDAMVYAFQRLDSDISLEAQVPTNNEFLRNLTLQVAFSGATACVSHIDGIHLHIANSGDCRAI 294

  Fly   231 LGVLDPQTQQWHSKKLNIEHNADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYK 295
            |||.| ....|.:..|..:|||.|.:|::|:.||||..|.:|::.:.|||..|.|.|||||..:|
 Frog   295 LGVQD-DNGAWSAVPLTADHNAFNKAELQRLNAEHPPSEKDTLVTDNRLLGILMPFRAFGDVIFK 358

  Fly   296 WSQEIMQQKVL------PMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLWDFLP 354
            ||:|:.:..:|      |:...|....||:|||||:|.|:|..|:|.|.||||::|||||||.|.
 Frog   359 WSRELQKSVLLNACDLEPLNIYQYSPSNYHTPPYLSAEPEVTYHKLRPQDKFLIMASDGLWDMLE 423

  Fly   355 PSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTRKPV-DQNAATHLIRHALGG 418
            ..:||.||..|:....:.|| .|.....:|..:...|..|::  .:.|| |||.||||||||:|.
 Frog   424 NEQVVKLVANHLLENFLQEP-ELSAQKRSLGNMHNLLLNRQS--KKVPVPDQNIATHLIRHAIGS 485

  Fly   419 TDYG-IEHSKISYYLTLPRDAVRLYRDDITITVIYFNSEHIAKLHSD 464
            .:.| ||..|::..|:||.|..|:||||||:|||:|||..|...:.:
 Frog   486 NEDGDIEQEKLATMLSLPEDLARMYRDDITVTVIFFNSSAIETYYKE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdpNP_001245567.1 PP2Cc 58..394 CDD:238083 142/374 (38%)
pdp2XP_002942040.2 PP2Cc 113..521 CDD:238083 175/432 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I3779
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 313 1.000 Inparanoid score I2533
OMA 1 1.010 - - QHG52867
OrthoDB 1 1.010 - - D186269at33208
OrthoFinder 1 1.000 - - FOG0002436
OrthoInspector 1 1.000 - - otm49456
Panther 1 1.100 - - LDO PTHR13832
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4300
SonicParanoid 1 1.000 - - X558
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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