DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12155 and CG13204

DIOPT Version :9

Sequence 1:NP_572403.1 Gene:CG12155 / 31682 FlyBaseID:FBgn0029957 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster


Alignment Length:597 Identity:114/597 - (19%)
Similarity:206/597 - (34%) Gaps:153/597 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KDNAPTDDILTLINLVRQNPVLYNYKLQPNQRRRSDVLNGWQEVAQQIGNKYTVQEVRRKWKNLR 77
            :.:..:|:....|.:|::..|:|| ...|:.:.....|..|.::|.:||  .:|:..:|||||||
  Fly    12 ESSTTSDNTSDFIEIVKKYDVVYN-NHNPDYKNVEVKLKVWTQIADEIG--LSVEASKRKWKNLR 73

  Fly    78 DTFHQYRLRTPKYIEGRLSK----WRYAKELDFLSKVYQPKLKSHRNTQITYETSGVAGAGGGIG 138
            |::.:| ||:.: :..:.||    |.:|..:|||.....|    .||:         |...|...
  Fly    74 DSYTKY-LRSFR-VGTKTSKKYQYWAHADHMDFLKPFQGP----GRNS---------ANGNGKSN 123

  Fly   139 GANSTTLPIGAMLHLKQHVDDDDDEVMDDDGQSDHDTATLSSHHGTSQITLVSDEAETFILTAYE 203
            ..:.|....|..:..|...:..:||:......:....:::.:|...:..|.:|..:.:.|.::..
  Fly   124 DEDDTECDFGYQVLAKAASNGGEDELKITIATASAGCSSMGTHTVNTYTTALSSTSASGITSSLG 188

  Fly   204 EGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHHHHHHHQSQHDGSIS-SIELSQIAHDDDVVDDVD 267
            .....:.:|...:....|........|.|:        |..:||.: |:..:.:|....:.... 
  Fly   189 ATTPPNMISPGSNLGGTGGGSGSVGPQIHN--------SNSNGSATGSLNCAAVAPLSSMTPPA- 244

  Fly   268 DEDDVVDHDGQLDIVKHELDEDGATGAEVDYEEVCLYEEASGAHVDCEIGVGDAVDGGSDVTH-- 330
                                ..|:..|.|  ..:.:...:|.|.....:...:|....|...|  
  Fly   245 --------------------TSGSNSAVV--LPLPISPASSVAAAAAAVSKANANALASLANHLP 287

  Fly   331 -GKGFHYIDTHEFCISDIE----------PQTVRSSQHQFSASGGSGNGSNSVLTGGTVV----- 379
             |.|...:....|.::.::          |.|:...    ..|.||...||   .|..::     
  Fly   288 MGLGVSGLAQQMFPLATLKAAAVAAGLPLPPTITPP----GCSTGSATNSN---VGCLIIEPHLF 345

  Fly   380 --TDGKVKNLTLVTTTSPAAGGGGSTNRHDSSVSTQQISLVDVTEATSTSVTISSTPAISLNATT 442
              .|...|.||       ||...|:......:::.|      |..|...:   .|.|::.:...|
  Fly   346 AAADNFKKELT-------AAAAAGAPLGLFQNLANQ------VQNANRLN---GSCPSLPMGNPT 394

  Fly   443 VTTTPAAALCNTTSFTSTPTATIIQMPPLNCGSGQPLAVSAAASSSNNLIKEDEQ-------HQQ 500
            ....|.|          .|.:.:.::.|    |.|..|::.:.|..|::..:.:|       .||
  Fly   395 PPPPPPA----------PPASKVRRVQP----SPQTTAINLSCSGGNSVQTQQQQSMQMPQIQQQ 445

  Fly   501 QQ-------------------VAQALAKRDELD---LFFDFLKK-------------KMQCFSKT 530
            ||                   |:..|....|||   |||..|.:             ||:|....
  Fly   446 QQPSPAKTRKICDPRFPSDWDVSAVLQANRELDANTLFFLSLARQVRAMPMKFQSLAKMRCMRIV 510

  Fly   531 QITHIQMEFLNC 542
            ....:::|..:|
  Fly   511 SDLELELENFDC 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12155NP_572403.1 MADF 24..112 CDD:214738 30/91 (33%)
CG13204NP_610678.1 MADF 22..108 CDD:214738 30/90 (33%)
BESS 478..510 CDD:281011 8/31 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001895
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.