DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and AT1G11160

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_172582.2 Gene:AT1G11160 / 837657 AraportID:AT1G11160 Length:1021 Species:Arabidopsis thaliana


Alignment Length:981 Identity:195/981 - (19%)
Similarity:309/981 - (31%) Gaps:386/981 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSDCGRVVIWNLLPVLSDKAEFDADVPKMLCQMDQHLACVNCVRWSQNGQNLASGSDDKLIMIW- 97
            |:..|.:.:|            |.:..||:.....|.:..:.|.:...|:.|||||.|..:.:| 
plant    76 GASSGVIKLW------------DLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128

  Fly    98 -RKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQA- 160
             ||..                   |..|.:||...:..:.:||:..::.|..:||.|.:||..| 
plant   129 TRKKG-------------------CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 174

  Fly   161 -FPHSVATLKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGT---- 220
             ..|.   .|.|.|.::.:.:.||...||:.|.||::|.|:          .|.||..|.|    
plant   175 KLLHE---FKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD----------LETFELIGTTRPEA 226

  Fly   221 THILRLSWSPDGQYLVSAHAMNGGGPT---AQIIERE----GWKCDKDF-VGHRKAVTCVRFHNS 277
            |.:..:::.||||.|..  .::.|...   ..:|.|:    ||....|| :...|.:.|..:.||
plant   227 TGVRAIAFHPDGQTLFC--GLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNS 289

  Fly   278 I------LSRQENDGSPSKPLQYCCL-----------AVGSRDR------------------SLS 307
            :      :|..|..|:.|:....|.:           .:||..|                  |..
plant   290 VGIWVSDISELEPYGAVSEDKNECMVKRFSVLNDQSERMGSGPRGSVSPDYETREIKNIYVDSTG 354

  Fly   308 VWMTALQRP--------------MVVIHELFNASIL------------------DLTWGPQECLL 340
            ..:...|.|              ..::.|..||:..                  :.::..:|.:.
plant   355 GNLNVAQNPGSLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERESIP 419

  Fly   341 MACSVDGSI--------ACLKF------------TEEELGKAISEE---------EQNA------ 370
            .:.:..|.:        ...||            |.::.|.|:.||         ||||      
plant   420 FSRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNASKPFDA 484

  Fly   371 ---IIRKMYGKNYVNGLGKSAPVLEHPQRLLLPQGDKPTKFPLSNNNEAN--------------- 417
               ||:.:..| :...| .|.|..:...|:.|    ||.:...|:|::.|               
plant   485 EDSIIKGITNK-FEKAL-SSEPPTDEANRMFL----KPPRIHRSSNSKYNDTRRAMSADPATFGK 543

  Fly   418 ----------------------QRPISKQTETRTKDGKRRITPMFIPLHEDGPTSLSMNIVS--- 457
                                  ::|..:|..|....|.|.:.|:.|   .:|     :|:||   
plant   544 GGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKI---VEG-----VNVVSGRT 600

  Fly   458 ---------------SSGSSTTALTSCSAA----------IGTLPAAAPTESAATP--LMPLEPL 495
                           :.|:|||...:.:|.          .|..|..:...:.:||  :||    
plant   601 RSLVEKFERGEKTTHTEGASTTIEQNNNAVQEDPRKTSRQTGETPVISTRRARSTPARVMP---- 661

  Fly   496 VSKIDLGRLDSRLK------TQPASQRRQSLPFDP----GQSNELLRTPRLEEHQSSTCS----- 545
               |.|.| ||.:.      ||||  |..|.|..|    ..||.....|.:...|.|..|     
plant   662 ---IVLNR-DSNVTSDEPPLTQPA--RTSSFPVMPVILNQASNVTYDEPSVALTQESRTSHARIL 720

  Fly   546 PSNLNVTATGKSEFVKAALDYRLHVSNGHLKTQHGMLAKVTASDSKEMLWEFYVGSPLVNLNLCE 610
            |...|......||  :|::..|....|...:.:..:|::.|:.:                     
plant   721 PVTFNQATNITSE--EASVTLRRQRRNSAARVRPVLLSQATSHE--------------------- 762

  Fly   611 KYAMLCSLDGSMRLISMETGCPV--------FPA----------ISLTSSAVHCA----FSPDNS 653
                                |||        .||          :::||...|.|    .||...
plant   763 --------------------CPVTSVRPLRTSPARVMPTKLNQSVNMTSDTSHIASMHRVSPTQM 807

  Fly   654 LVGVLTECGLLRIWDIAKKVVSLAAGCLELLNKHGTAAQFSVTNQGM---PLIGFPSGNS----- 710
            |.              ...|:...|. :.|...|.|..|.:..|...   |.|.....:|     
plant   808 LA--------------TPTVIDQVAD-MTLDETHATQIQPACDNMPQKEEPNISDREDDSDITEN 857

  Fly   711 -----YSYSTSLQSWLVLATKDAIMYH--------GIRGTLPRDMDQ---------MQQKFPLLS 753
                 ..:.::|||.|   ||..|:.|        |..|.|.:..||         :.:|..:|:
plant   858 LMLTHNEFLSTLQSRL---TKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTEKIEILT 919

  Fly   754 MQASSQ 759
            :...||
plant   920 LDMFSQ 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 91/447 (20%)
WD40 14..349 CDD:238121 82/397 (21%)
WD40 repeat 16..68 CDD:293791 6/33 (18%)
WD40 repeat 74..127 CDD:293791 13/54 (24%)
WD40 repeat 132..169 CDD:293791 10/38 (26%)
WD40 repeat 176..211 CDD:293791 9/34 (26%)
WD40 repeat 223..263 CDD:293791 12/47 (26%)
WD40 repeat 275..322 CDD:293791 13/95 (14%)
WD40 repeat 328..350 CDD:293791 2/47 (4%)
HIRA_B 423..442 CDD:286531 5/18 (28%)
Hira 629..820 CDD:284895 39/183 (21%)
AT1G11160NP_172582.2 WD40 3..253 CDD:238121 56/222 (25%)
WD40 <7..310 CDD:225201 70/279 (25%)
WD40 repeat 19..56 CDD:293791
WD40 repeat 61..97 CDD:293791 6/32 (19%)
WD40 repeat 104..139 CDD:293791 13/53 (25%)
WD40 repeat 145..181 CDD:293791 10/38 (26%)
WD40 repeat 187..222 CDD:293791 13/44 (30%)
WD40 repeat 229..254 CDD:293791 6/26 (23%)
Katanin_con80 864..1015 CDD:290636 17/65 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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