DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and CHAF1B

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_005432.1 Gene:CHAF1B / 8208 HGNCID:1911 Length:559 Species:Homo sapiens


Alignment Length:602 Identity:147/602 - (24%)
Similarity:242/602 - (40%) Gaps:121/602 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AWVHHDDKQIFSVD--------IHKDCTKFATGGQGSDCGRVVIWNLLPVLSDKAEFDADVPKML 63
            ||  |:.:.::|:|        ||    :.|:.|..::   |.||.:     :|......:.:.|
Human     9 AW--HNKEPVYSLDFQHGTAGRIH----RLASAGVDTN---VRIWKV-----EKGPDGKAIVEFL 59

  Fly    64 CQMDQHLACVNCVRWSQNGQNLASGSDDKLIMIWR----KSAGSSGVFGTGGMQKNHESWKCFYT 124
            ..:.:|...||.||:|..|:.||||.||.:|::|:    |.............|.|.|:|....|
Human    60 SNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKT 124

  Fly   125 LRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGRFLAS 189
            ||||..||.|:.|:.:...:||.|:|||.||||... ...::....|...|:||:|||||:::|:
Human   125 LRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSK-GQKISIFNEHKSYVQGVTWDPLGQYVAT 188

  Fly   190 QSDDRSIKIWNTMNWSLSHTITEPFEECGG---------------TTHILRLSWSPDGQYLVS-- 237
            .|.||.:::::.....::..:::.....|.               .:...|||::|||..|::  
Human   189 LSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPA 253

  Fly   238 ------AHAMNGGGPTAQIIEREGWKCDKDFVGH-------RKAVTCVRFHNSILSRQENDGSPS 289
                  .:.||    |..:..|:..|..   :.|       ..||.|...:..:....|. |...
Human   254 GCVESGENVMN----TTYVFSRKNLKRP---IAHLPCPGKATLAVRCCPVYFELRPVVET-GVEL 310

  Fly   290 KPLQY-CCLAVGSRDRSLSVWMTALQRPMVVIHELFNASILDLTWGPQECLLMACSVDGSIACLK 353
            ..|.| ...||.|.| |:.::.|....|...:..:...::.|::|......|...|.||..:.:.
Human   311 MSLPYRLVFAVASED-SVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVT 374

  Fly   354 FTEEELGKAISEEEQNAIIRKMYGKNYVNGLGKSAPVLEHPQRLLLPQGDKPTKFPLSNNNEANQ 418
            |.::|||..:.|:                      |||    .:..|...|.||......:....
Human   375 FEKDELGIPLKEK----------------------PVL----NMRTPDTAKKTKSQTHRGSSPGP 413

  Fly   419 RPISKQTETRTKDGKR-----------------RITPMFIPLHED---GPTSLSMNIVSSSGSST 463
            ||:.....:||:|...                 |..|...|..:.   ||:  ....:..|..:|
Human   414 RPVEGTPASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPS--EEKTLQPSSQNT 476

  Fly   464 TALTSCSAAIGTLPAAAPTESAATP-LMPLEPLVSKIDLGRLDSRLKTQPASQRRQS-LPFDPGQ 526
            .|..|....:.||.|.:.|    || .:.|.||.:......:.:.:.:.|:::..|| .|.|...
Human   477 KAHPSRRVTLNTLQAWSKT----TPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQG 537

  Fly   527 SNELLRTPRLEEHQSST 543
            |...|:.|||:|::..|
Human   538 SPPELKRPRLDENKGGT 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 102/400 (26%)
WD40 14..349 CDD:238121 97/377 (26%)
WD40 repeat 16..68 CDD:293791 11/59 (19%)
WD40 repeat 74..127 CDD:293791 20/56 (36%)
WD40 repeat 132..169 CDD:293791 13/36 (36%)
WD40 repeat 176..211 CDD:293791 11/34 (32%)
WD40 repeat 223..263 CDD:293791 12/47 (26%)
WD40 repeat 275..322 CDD:293791 11/47 (23%)
WD40 repeat 328..350 CDD:293791 6/21 (29%)
HIRA_B 423..442 CDD:286531 5/35 (14%)
Hira 629..820 CDD:284895
CHAF1BNP_005432.1 WD 1 11..54 11/54 (20%)
WD40 <13..251 CDD:330360 71/250 (28%)
WD40 repeat 16..64 CDD:293791 11/59 (19%)
WD 2 64..103 16/38 (42%)
WD40 repeat 70..127 CDD:293791 20/56 (36%)
WD 3 127..166 16/39 (41%)
WD40 repeat 132..168 CDD:293791 13/36 (36%)
WD 4 169..208 13/38 (34%)
WD40 repeat 175..230 CDD:293791 12/54 (22%)
WD 5 228..279 12/57 (21%)
WD 6 299..340 11/42 (26%)
WD 7 344..385 10/40 (25%)
CAF-1_p60_C 381..555 CDD:317861 44/206 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..559 43/201 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366817at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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