DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hira and WDR26

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001366332.1 Gene:WDR26 / 80232 HGNCID:21208 Length:761 Species:Homo sapiens


Alignment Length:334 Identity:72/334 - (21%)
Similarity:115/334 - (34%) Gaps:96/334 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDG 130
            :.:|...|...::|.:|..||:||.|..::||:             :..:....|...||.||..
Human   451 LTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQ-------------VDPDTHLLKLLKTLEGHAY 502

  Fly   131 DVLDLAWSPNDVYLASCSID--NTVIIWDAQAFPHSVATLKGHTGLVKGVSWDP----------L 183
            .|..:||||:|.||.:|..|  :.:.:|:.|.........:.|...:..|:|:|          .
Human   503 GVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQR 567

  Fly   184 GRFLASQSDDRSIKIWNTMN----WSLSHTITEPFEECGGTTH---------------------- 222
            |:|.....|...:..|..:.    |.||...|    .....||                      
Human   568 GQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKT----VLASDTHQRIRGYNFEDLTDRNIVQEDHP 628

  Fly   223 ILRLSWSPDGQYLVSAHAMNGGGPTAQIIEREGWKC-DKDFVGHRKAVT--------CVRFHNSI 278
            |:..:.|.:|:..:...|..|         ...|.. |:..|...:.||        |...||..
Human   629 IMSFTISKNGRLALLNVATQG---------VHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNED 684

  Fly   279 LSRQENDGSPSKPLQYCCLAVGSRDRSLSVWMTALQRPMVVIHEL--FNASILDLTWGPQECLLM 341
            .                 :|.||.|..:.:|....:.|   |.||  ...::..::|.||...:|
Human   685 F-----------------IASGSEDHKVYIWHKRSELP---IAELTGHTRTVNCVSWNPQIPSMM 729

  Fly   342 A-CSVDGSI 349
            | .|.||::
Human   730 ASASDDGTV 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 72/334 (22%)
WD40 14..349 CDD:238121 72/332 (22%)
WD40 repeat 16..68 CDD:293791 0/1 (0%)
WD40 repeat 74..127 CDD:293791 12/52 (23%)
WD40 repeat 132..169 CDD:293791 12/38 (32%)
WD40 repeat 176..211 CDD:293791 10/48 (21%)
WD40 repeat 223..263 CDD:293791 7/40 (18%)
WD40 repeat 275..322 CDD:293791 9/46 (20%)
WD40 repeat 328..350 CDD:293791 8/23 (35%)
HIRA_B 423..442 CDD:286531
Hira 629..820 CDD:284895
WDR26NP_001366332.1 LisH_TPL 226..253 CDD:375350
CTLH 256..331 CDD:128914
WD40 449..741 CDD:238121 72/334 (22%)
WD40 repeat 459..499 CDD:293791 12/52 (23%)
WD40 repeat 504..542 CDD:293791 12/37 (32%)
WD40 repeat 550..584 CDD:293791 6/33 (18%)
WD40 repeat 588..633 CDD:293791 7/48 (15%)
WD40 repeat 642..710 CDD:293791 18/96 (19%)
WD40 repeat 716..741 CDD:293791 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.