DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and Wdr33

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001100868.2 Gene:Wdr33 / 307524 RGDID:1309230 Length:1331 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201
WD40 14..349 CDD:238121
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..127 CDD:293791
WD40 repeat 132..169 CDD:293791
WD40 repeat 176..211 CDD:293791
WD40 repeat 223..263 CDD:293791
WD40 repeat 275..322 CDD:293791
WD40 repeat 328..350 CDD:293791
HIRA_B 423..442 CDD:286531
Hira 629..820 CDD:284895
Wdr33NP_001100868.2 WD40 121..>405 CDD:225201
WD40 121..402 CDD:238121
WD40 repeat 122..159 CDD:293791
WD40 repeat 165..200 CDD:293791
WD40 repeat 205..241 CDD:293791
WD40 repeat 248..285 CDD:293791
WD40 repeat 291..328 CDD:293791
WD40 repeat 336..371 CDD:293791
WD40 repeat 378..402 CDD:293791
Med15 565..>972 CDD:255446
Collagen 717..769 CDD:189968
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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