DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and Ciao1

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001008766.1 Gene:Ciao1 / 29231 RGDID:1307285 Length:339 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201
WD40 14..349 CDD:238121
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..127 CDD:293791
WD40 repeat 132..169 CDD:293791
WD40 repeat 176..211 CDD:293791
WD40 repeat 223..263 CDD:293791
WD40 repeat 275..322 CDD:293791
WD40 repeat 328..350 CDD:293791
HIRA_B 423..442 CDD:286531
Hira 629..820 CDD:284895
Ciao1NP_001008766.1 WD 1 14..53
WD40 17..332 CDD:238121
WD40 repeat 19..58 CDD:293791
WD40 22..>335 CDD:225201
WD 2 59..98
WD40 repeat 65..103 CDD:293791
WD 3 103..142
WD40 repeat 108..147 CDD:293791
WD 4 148..187
WD40 repeat 154..191 CDD:293791
LYR motif, required for interaction with HSC20. /evidence=ECO:0000250|UniProtKB:O76071 176..178
WD 5 192..231
WD40 repeat 197..248 CDD:293791
WD 6 250..289
WD40 repeat 255..295 CDD:293791
WD 7 301..339
WD40 repeat 306..331 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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