DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and pwp2h

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_998212.1 Gene:pwp2h / 266990 ZFINID:ZDB-GENE-021031-3 Length:937 Species:Danio rerio


Alignment Length:537 Identity:101/537 - (18%)
Similarity:186/537 - (34%) Gaps:184/537 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DKQIFSVDIHK--DCTKFATGGQGSDCGRVVIWNLLPVLSDKAEFDADVPKMLCQMDQHLACVNC 75
            |::|.::.::.  |...|...|    .|::::|          |:.::  ..:.:...|...:|.
Zfish   342 DQRISAISLNPTGDWISFGCSG----LGQLLVW----------EWQSE--SYVFKQQGHFNNMNS 390

  Fly    76 VRWSQNGQNLASGSDDKLIMIWRKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDGDVLDLAWSPN 140
            :.:|.:||.||:|.||..:.:|..::|                 .||.|...|...|.::|::.:
Zfish   391 LAYSPDGQYLATGGDDGKVKVWNTNSG-----------------LCFVTFTEHSSGVTEVAFTSS 438

  Fly   141 DVYLASCSIDNTVIIWDA-------------------------------------QAFPHSVAT- 167
            ...:.|.|:|.||..:|.                                     :.|..|:.| 
Zfish   439 GFVVVSASLDGTVRAFDLHRYRNFRTMTSPRPAQFSSLAVDGSGELVCAGSQDSFEIFLWSMQTG 503

  Fly   168 -----LKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTM-NWSLSHTITEPFEECGGTTHILRL 226
                 |.||.|.|..:.:.|:...|||.|.|:::::|:.: :|....|:..       |:..|.:
Zfish   504 RLLEVLSGHEGPVSNLCFSPVQSVLASVSWDKTVRLWDMLDSWQTKETLQL-------TSDGLAV 561

  Fly   227 SWSPDGQYLVSAHAMNG---------GGPTAQIIEREGWKCDKDFVGHRKAVTCVRFHNSILSRQ 282
            ::.|:|..|..| :::|         |..|..|..|                     |:..:.|:
Zfish   562 TYHPNGMELAVA-SLDGEITFWNPQTGRQTGSITGR---------------------HDLQMGRK 604

  Fly   283 END----GSPSKPLQYCCLAVGSRDRSLSVWMTALQRPMVVIHELFNASILDLTWGPQECLLM-- 341
            |::    ...:|...:..|...:...|:   :|..:...|.|:.:            :|.|||  
Zfish   605 ESEKITAKQSAKGKSFTTLCYSADGESI---LTGGKSKFVCIYNI------------KEHLLMKK 654

  Fly   342 ---ACSVDGSIACLKFTEEELGKAISEEEQNAIIRKM----------YGKNYVNGLGKSAPVLEH 393
               :|::.     |...||.|.:           |||          .|....||:..|.|.:: 
Zfish   655 FEISCNLS-----LDAMEEFLDR-----------RKMTEFGSLSLVDEGTGDGNGVELSLPGVK- 702

  Fly   394 PQRLLLPQGDKPTKF--PLSNNNEANQRPISKQTETRTKDG----KRRITPMFIPLHED---GPT 449
                   :||..|:.  |..:.:.....|..:.....:.:|    ......:|.|...|   .||
Zfish   703 -------KGDMSTRCFKPEISVSSLRFSPTGRSWAAASTEGLLIYSLDAALVFDPYDLDIDVTPT 760

  Fly   450 SLSMNIVSSSGSSTTAL 466
            |:...|.....:|...|
Zfish   761 SIRQQITKKEWASAILL 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 78/420 (19%)
WD40 14..349 CDD:238121 73/398 (18%)
WD40 repeat 16..68 CDD:293791 7/53 (13%)
WD40 repeat 74..127 CDD:293791 14/52 (27%)
WD40 repeat 132..169 CDD:293791 11/79 (14%)
WD40 repeat 176..211 CDD:293791 9/35 (26%)
WD40 repeat 223..263 CDD:293791 10/48 (21%)
WD40 repeat 275..322 CDD:293791 9/50 (18%)
WD40 repeat 328..350 CDD:293791 5/26 (19%)
HIRA_B 423..442 CDD:286531 2/22 (9%)
Hira 629..820 CDD:284895
pwp2hNP_998212.1 WD40 1..460 CDD:225201 32/150 (21%)
WD40 55..413 CDD:295369 18/86 (21%)
WD40 repeat 101..142 CDD:293791
WD40 repeat 148..280 CDD:293791
WD40 <292..647 CDD:225201 69/381 (18%)
WD40 334..645 CDD:238121 69/367 (19%)
WD40 repeat 345..383 CDD:293791 7/53 (13%)
WD40 repeat 389..425 CDD:293791 14/52 (27%)
WD40 repeat 430..466 CDD:293791 8/35 (23%)
WD40 repeat 474..510 CDD:293791 3/35 (9%)
WD40 repeat 516..552 CDD:293791 9/35 (26%)
WD40 repeat 558..613 CDD:293791 13/76 (17%)
WD40 repeat 620..644 CDD:293791 4/26 (15%)
Utp12 786..884 CDD:281932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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