DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hira and wdr-5.1

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_497749.1 Gene:wdr-5.1 / 175474 WormBaseID:WBGene00006474 Length:376 Species:Caenorhabditis elegans


Alignment Length:296 Identity:70/296 - (23%)
Similarity:123/296 - (41%) Gaps:66/296 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TKFATGGQGSDCGR----------VVIWNLLPVLSDKAEFDADVPKMLCQ--MDQHLACVNCVRW 78
            ||..:..:.|.||:          |.|||:              ..|:|:  :..|...||.:.|
 Worm    87 TKSISSAKFSPCGKYLGTSSADKTVKIWNM--------------DHMICERTLTGHKLGVNDIAW 137

  Fly    79 SQNGQNLASGSDDKLIMIWRKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDGDVLDLAWSPNDVY 143
            |.:.:.:.|.||||.:.|:.        ..|..|.|         ||:||:..|....::|....
 Worm   138 SSDSRCVVSASDDKTLKIFE--------IVTSRMTK---------TLKGHNNYVFCCNFNPQSSL 185

  Fly   144 LASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTMNWSLSH 208
            :.|.|.|.:|.|||.:. ...:.||..|:..|..||::..|..:||.|.|..::||:|.|.....
 Worm   186 VVSGSFDESVRIWDVKT-GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249

  Fly   209 TITEPFEECGGTTHILRLSWSPDGQYLVSAHAMNGGGPTAQIIEREGWKCDKDFVGHRKAVTCVR 273
            |:.:  :|   ...:..:.:||:|:|:::::.    ..|.::.:....|..|.:.||..:..|:.
 Worm   250 TLVD--DE---NPPVAFVKFSPNGKYILASNL----DSTLKLWDFSKGKTLKQYTGHENSKYCIF 305

  Fly   274 FHNSILSRQENDGSPSKPLQYCCLAVGSRDRSLSVW 309
            .:.|:...:             .:..||.|..:.:|
 Worm   306 ANFSVTGGK-------------WIISGSEDCKIYIW 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 70/296 (24%)
WD40 14..349 CDD:238121 70/296 (24%)
WD40 repeat 16..68 CDD:293791 11/53 (21%)
WD40 repeat 74..127 CDD:293791 14/52 (27%)
WD40 repeat 132..169 CDD:293791 10/36 (28%)
WD40 repeat 176..211 CDD:293791 12/34 (35%)
WD40 repeat 223..263 CDD:293791 7/39 (18%)
WD40 repeat 275..322 CDD:293791 5/35 (14%)
WD40 repeat 328..350 CDD:293791
HIRA_B 423..442 CDD:286531
Hira 629..820 CDD:284895
wdr-5.1NP_497749.1 WD40 <76..372 CDD:225201 70/296 (24%)
WD40 79..373 CDD:238121 70/296 (24%)
WD40 repeat 90..127 CDD:293791 9/50 (18%)
WD40 repeat 133..169 CDD:293791 14/52 (27%)
WD40 repeat 174..210 CDD:293791 10/36 (28%)
WD40 repeat 217..252 CDD:293791 12/34 (35%)
WD40 repeat 259..295 CDD:293791 7/39 (18%)
WD40 repeat 303..340 CDD:293791 6/39 (15%)
WD40 repeat 346..372 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.