DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and AgaP_AGAP012029

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:XP_320491.4 Gene:AgaP_AGAP012029 / 1280633 VectorBaseID:AGAP012029 Length:378 Species:Anopheles gambiae


Alignment Length:382 Identity:89/382 - (23%)
Similarity:152/382 - (39%) Gaps:95/382 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLK--GHTGLVKGVSWDPLGRFL 187
            |:||.|.:..|:::|......:.|.|::.|:|...   ..|..::  .||.:|..|.|.|.||.:
Mosquito    10 LKGHRGKLTGLSFNPEGTRFVTSSTDHSAIVWTNN---EQVRCMRFEAHTDVVNDVCWSPDGRII 71

  Fly   188 ASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVSAHAMNGGGPTAQIIE 252
            ::.|.|||:|||      :...:....|..|.|:::..:.:.|.|:.|::|    ....|.::  
Mosquito    72 STVSKDRSVKIW------VPSMLGNSDEFRGHTSNVRSVDFDPTGKKLLTA----SDDKTVKL-- 124

  Fly   253 REGWKCDK-----DFVGHRKAVTCVRFHNSILSRQENDGSPSKPLQYCCLAVGSRDRSLSVWMTA 312
               ||..:     .|.||...|.|.||            ||:..|...|    ..||:|.::..|
Mosquito   125 ---WKVSRKQFLSSFTGHTNWVRCARF------------SPNGKLIASC----GDDRTLKLFDPA 170

  Fly   313 LQRPMVVIHELFN--ASILDLTWGPQECLLMACSVDGSIAC-LKFTEEELGKAISEEEQNAIIRK 374
            ..:   .:|..::  .:...:.|.| :..|:|.::|.   | :|..:..:.|.|           
Mosquito   171 TGQ---CVHSFYDQKGAGCKVAWHP-DSTLVAIALDN---CRVKIFDINIRKLI----------- 217

  Fly   375 MYGKNY---VNGLGKSAPVLEHP--QRLLLPQGDKPTK----------FPLSNNNEANQRPISKQ 424
            .|.:.|   ||.|.      .||  ..|:....|..||          |.|:    .::.|::  
Mosquito   218 QYYRIYDGPVNSLD------FHPSGNYLITGSDDGVTKIIDLLEGRQIFTLT----GHRGPVT-- 270

  Fly   425 TETRTKDGKRRITPMFIPLHEDGPTSL-SMNIVSSSGSSTTALTSCSAAIGTLPAAA 480
            |...:|||:     :|....:|....| ..|:.:.|..::......|:...|.|||:
Mosquito   271 TVKFSKDGQ-----LFATGSDDCHVMLWKANLDNDSAQNSLYTPEGSSCESTHPAAS 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 61/254 (24%)
WD40 14..349 CDD:238121 57/232 (25%)
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..127 CDD:293791 1/1 (100%)
WD40 repeat 132..169 CDD:293791 7/36 (19%)
WD40 repeat 176..211 CDD:293791 12/34 (35%)
WD40 repeat 223..263 CDD:293791 7/44 (16%)
WD40 repeat 275..322 CDD:293791 8/46 (17%)
WD40 repeat 328..350 CDD:293791 5/21 (24%)
HIRA_B 423..442 CDD:286531 5/18 (28%)
Hira 629..820 CDD:284895
AgaP_AGAP012029XP_320491.4 WD40 8..294 CDD:238121 82/352 (23%)
WD40 10..312 CDD:225201 84/370 (23%)
WD40 repeat 17..54 CDD:293791 7/39 (18%)
WD40 repeat 60..96 CDD:293791 13/41 (32%)
WD40 repeat 101..137 CDD:293791 7/44 (16%)
WD40 repeat 144..179 CDD:293791 12/53 (23%)
WD40 repeat 186..219 CDD:293791 9/47 (19%)
WD40 repeat 227..263 CDD:293791 10/41 (24%)
WD40 repeat 269..293 CDD:293791 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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