DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and KATNB1

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_005877.2 Gene:KATNB1 / 10300 HGNCID:6217 Length:655 Species:Homo sapiens


Alignment Length:626 Identity:134/626 - (21%)
Similarity:221/626 - (35%) Gaps:153/626 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 NGQNLASGSDDKLIMIWRKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLA 145
            :|:.||:|.||..:.:|             .:.|.:    |..:|.||...|..:..:..:..:.
Human    32 SGRLLATGGDDCRVNLW-------------SINKPN----CIMSLTGHTSPVESVRLNTPEELIV 79

  Fly   146 SCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTI 210
            :.|...::.:||.:| ...:.||.||...:..:.:.|.|.|:||.|.|.:||:|:......    
Human    80 AGSQSGSIRVWDLEA-AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC---- 139

  Fly   211 TEPFEECGGTTHILRLSWSPDGQYLVSAHAMNGGGPTAQIIEREGWKCDKDFVGHRKAVTCVRFH 275
              .|...|.:..:..|.:||||::|.||    ....|.::.:....|...:|.||...|..|.||
Human   140 --VFRYRGHSQAVRCLRFSPDGKWLASA----ADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198

  Fly   276 NSILSRQENDGSPSKPLQYCCLAVGSRDRSLSVW-------MTALQ-RPMVVIHELFNA------ 326
                           |.:| .||.||.||::..|       ::.:: .|..|...|||.      
Human   199 ---------------PNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247

  Fly   327 -----SILDLTWGPQECLLMACSVDGSIACLKFTEEEL-GKAISEEEQNAIIRKMYGKNYVNGLG 385
                 |:....|.|:.|..:.....|.:|.|....::| |.|.|:...::.:..:   ..|...|
Human   248 SGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDL---TRVTRTG 309

  Fly   386 KSA--PVLEHPQRLLLPQGDKPTKFPLSNNNEANQRPISKQTETRTK--------DGKRRITPMF 440
            ..|  ||.:|          :|...||.|.:...:|...:.:.|.:|        :.:||     
Human   310 TVARDPVQDH----------RPLAQPLPNPSAPLRRIYERPSTTCSKPQRVKQNSESERR----- 359

  Fly   441 IPLHEDGPTSLSMNIVSSSGSSTTALTSCSAAIGTLPAAAPTESAATPLMPLEPLVSKIDLGRLD 505
            .|..||............:......:.....:|...|   |..|...|..|.:      |.....
Human   360 SPSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTP---PRRSEPFPAPPED------DAATAK 415

  Fly   506 SRLKTQPASQRRQSLPFDPGQSNELL-RTPRLEEHQSSTCSPSNLNVT-----ATGKSEFVKAAL 564
            ...|..||...:..:|     :.|:| |.|.:....:....|:.:..|     ....|:|:.|..
Human   416 EAAKPSPAMDVQFPVP-----NLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFLPAVK 475

  Fly   565 ----------DYRLHVSNGH------LKTQHGMLAKV----------TASDSKEMLWEFYVGSPL 603
                      |....:..||      |.::|..|..|          |:.||...:.:..|...|
Human   476 IPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVVVDL 540

  Fly   604 VNLNLCEKYAMLCSLDGSMRLIS-------------METGC 631
              ||:..:.|.|..||....::.             ::|||
Human   541 --LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGC 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 75/308 (24%)
WD40 14..349 CDD:238121 69/286 (24%)
WD40 repeat 16..68 CDD:293791
WD40 repeat 74..127 CDD:293791 10/45 (22%)
WD40 repeat 132..169 CDD:293791 6/36 (17%)
WD40 repeat 176..211 CDD:293791 10/34 (29%)
WD40 repeat 223..263 CDD:293791 10/39 (26%)
WD40 repeat 275..322 CDD:293791 12/54 (22%)
WD40 repeat 328..350 CDD:293791 4/21 (19%)
HIRA_B 423..442 CDD:286531 4/26 (15%)
Hira 629..820 CDD:284895 3/3 (100%)
KATNB1NP_005877.2 Interaction with centrosomes 1..300 75/311 (24%)
Interaction with dynein. /evidence=ECO:0000250 1..284 71/295 (24%)
WD40 7..257 CDD:238121 65/268 (24%)
WD40 repeat 67..103 CDD:293791 6/36 (17%)
WD40 repeat 108..144 CDD:293791 11/41 (27%)
WD40 repeat 151..186 CDD:293791 10/38 (26%)
WD40 repeat 192..228 CDD:293791 13/51 (25%)
WD40 repeat 234..261 CDD:293791 6/26 (23%)
Interaction with PAFAH1B1. /evidence=ECO:0000250 285..434 33/180 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..422 24/134 (18%)
DNA_pol3_gamma3 <386..>494 CDD:331207 21/121 (17%)
Interaction with KATNA1 and NDEL1. /evidence=ECO:0000250 433..655 30/149 (20%)
Katanin_con80 497..648 CDD:316447 18/85 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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