DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and hira

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:XP_002931950.2 Gene:hira / 100495450 XenbaseID:XB-GENE-976072 Length:1011 Species:Xenopus tropicalis


Alignment Length:1031 Identity:390/1031 - (37%)
Similarity:546/1031 - (52%) Gaps:187/1031 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLKPAWVHHDDKQIFSVDIHKDCTKFATGGQGSDCGRVVIWNLLPVLSDKAEFDADVPKMLCQ 65
            |:||||.||:|:.|.|||||||.|.|||||||||.|.|:|||||:.|:|.::.|.:.::||||||
 Frog     1 MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMPPLLKEEDEKNENIPKMLCQ 65

  Fly    66 MDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKSA--GSSGVFGTGGMQKNHESWKCFYTLRGH 128
            ||.|||||||||||.:|..||||.||||||:|::|.  |.|.|||:.....|.|.|:|...||.|
 Frog    66 MDNHLACVNCVRWSNSGAYLASGGDDKLIMVWKRSGYIGPSTVFGSSSKLANVEQWRCLSILRSH 130

  Fly   129 DGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLGRFLASQSDD 193
            .|||:|::|||:|.:|||||:||||:||:|..||..::||:||:|||||::|||:|:::|||:||
 Frog   131 SGDVMDVSWSPHDAWLASCSVDNTVVIWNALKFPEIISTLRGHSGLVKGLTWDPVGKYIASQADD 195

  Fly   194 RSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVSAHAMNGGGPTAQIIEREGWKC 258
            ||||:|.||:|.|..:||:||:|||||||:|||||||||.|||||||||..|||||||||:|||.
 Frog   196 RSIKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQIIERDGWKA 260

  Fly   259 DKDFVGHRKAVTCVRFHNSILSRQENDGSPSKP-LQYCCLAVGSRDRSLSVWMTALQRPMVVIHE 322
            :.||||||||||.|:|:..|..:::.:||.:|. ..|||.||||:|||||||:|.|:||:|||||
 Frog   261 NMDFVGHRKAVTVVKFNPKIFKKKQKNGSSTKTNCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHE 325

  Fly   323 LFNASILDLTWGPQECLLMACSVDGSIACLKFTEEELGKAISEEEQNAIIRKMYGKN--YVNGLG 385
            ||:.||:|::|......::.||:|||:|.|.|:::|||..:||||:|.|.:..|||:  ......
 Frog   326 LFDKSIMDISWTLNGLGILVCSMDGSVAYLDFSQDELGDPLSEEEKNNIHQTTYGKSLAITTEPQ 390

  Fly   386 KSAPVLEHPQRLLLPQGDKP-----------TKFPLSN-----NNEA----NQRPISKQTETRTK 430
            .|..|:|:|:.|...|..:|           .:.|..|     |.|:    .:..:.||.||||.
 Frog   391 LSNTVIENPEMLKFQQRQQPHQDGEHRVQAQREAPAHNVASMVNGESLEDIRKNLLKKQVETRTA 455

  Fly   431 DGKRRITPMFIPLHEDGP----------------------------TSLSMNIVSSSGSSTTALT 467
            ||:|||||:.|...:.|.                            .||..|..||||:..   :
 Frog   456 DGRRRITPLCIAQLDTGDFSTAFFNSIPISGALPGSMLTSQSNQQLISLDSNTTSSSGAPK---S 517

  Fly   468 SCSAAIGTLPA------AAPTESAATPLMP--------LEPL-------------------VSKI 499
            :...|..|.||      .:...|:::|:.|        :||:                   |:.:
 Frog   518 NAELAGNTKPAEETVNKESGNASSSSPVAPNSISAQPKIEPMKALDSRFTERSKATSGTAGVAHL 582

  Fly   500 DLGRLDSRLKTQ----------------------PA----SQRRQSLPFDPGQSNELLR---TPR 535
            :...:| |||.|                      ||    |:|:.....|.|:..:..|   .||
 Frog   583 NQTAVD-RLKEQNVTKDSKPREVLESSSDSEEKIPATKQLSKRKGESDADLGEKRKKGRPRKDPR 646

  Fly   536 LE-----EHQSSTCSPSNLNVTATG------------KSEFVKAALDYRLHVS-NGHLKTQHG-M 581
            |.     :.|.::.|...|....|.            ||..|:.:.|..:::. ...:||..| .
 Frog   647 LSVSLTLQSQVASTSEKELTCVTTSSLTLKLPTPTPQKSFTVQLSSDPSMYIEVENEVKTVGGNK 711

  Fly   582 LAKVTA-SDSKEMLWEFYV--------GSPLVNLNLCEKYAMLCSLDGSMRLISMETGCPVFPAI 637
            |:::.. .:.||  ||..:        ||..|....||| .||....||        |..:||.|
 Frog   712 LSQLKCHREGKE--WEAVLTSRILAAAGSNEVVCVACEK-RMLSIFSGS--------GRRLFPPI 765

  Fly   638 SLTS--SAVHCAFSPDNSLVGVLTECGLLRIWDIAKKVVSLAAGCLE--LLNKHGTAAQFSVTNQ 698
            .|.|  |.:.|.    .|.|..||....|.:||:..:.|.:....|:  |.....|.:|..:|.:
 Frog   766 ILPSPISTLQCT----GSYVMALTAAAALSVWDVQNQKVIIKDESLQPLLSGNDMTVSQTLLTKR 826

  Fly   699 GMPLIGFPSGNSYSYSTSLQSWLVLATKDAIMYH--GIRGTLPRDMDQMQQKFPLLSMQASSQNY 761
            |:|::...:|.:|.:|.||.:|.:::.|...:..  ..|..:| ..|.:....||..:|..:.| 
 Frog   827 GIPVLNLSNGKAYCFSPSLSTWSLVSDKQDSLTQCADYRNCMP-SQDAIMCSGPLAIIQGRASN- 889

  Fly   762 FSFTGSMELR-----HSESWQQCAKIRFIENQIKLCEALQSLDELQHWHKMLTFQLATHGSEKRM 821
               .|....|     |..  ||...:.::|||:.....|||..|.:||..:....|...|.|:|:
 Frog   890 ---AGRQAARLFTMPHQV--QQETTMAYLENQVAAALMLQSSQEYRHWLLIYARYLVNEGFEQRL 949

  Fly   822 RVFLDDLLS-MPEPGISQF------VPKLELMQCVLDTLKPHSEWNRLHSEYTELL 870
            |....|||. :.....||:      :.|.||::.:|..:..:..:.||.:||.|.|
 Frog   950 REVCQDLLGPVHNSSDSQWESRILGLRKRELLKELLPLIGQNLRFQRLFTEYQEQL 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 222/360 (62%)
WD40 14..349 CDD:238121 211/337 (63%)
WD40 repeat 16..68 CDD:293791 34/51 (67%)
WD40 repeat 74..127 CDD:293791 29/54 (54%)
WD40 repeat 132..169 CDD:293791 21/36 (58%)
WD40 repeat 176..211 CDD:293791 20/34 (59%)
WD40 repeat 223..263 CDD:293791 31/39 (79%)
WD40 repeat 275..322 CDD:293791 25/47 (53%)
WD40 repeat 328..350 CDD:293791 8/21 (38%)
HIRA_B 423..442 CDD:286531 13/18 (72%)
Hira 629..820 CDD:284895 54/201 (27%)
hiraXP_002931950.2 WD40 7..352 CDD:238121 214/344 (62%)
WD40 repeat 16..68 CDD:293791 34/51 (67%)
WD40 repeat 74..129 CDD:293791 29/54 (54%)
WD40 repeat 134..171 CDD:293791 21/36 (58%)
WD40 repeat 178..213 CDD:293791 20/34 (59%)
WD40 repeat 226..265 CDD:293791 31/38 (82%)
WD40 repeat 273..324 CDD:293791 26/50 (52%)
WD40 repeat 331..353 CDD:293791 8/21 (38%)
HIRA_B 448..470 CDD:370503 14/21 (67%)
Mcl1_mid <708..>782 CDD:372058 25/88 (28%)
Hira 758..948 CDD:369430 54/200 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9625
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H48172
Inparanoid 1 1.050 598 1.000 Inparanoid score I949
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366817at33208
OrthoFinder 1 1.000 - - FOG0003162
OrthoInspector 1 1.000 - - oto102422
Panther 1 1.100 - - LDO PTHR13831
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3052
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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