DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hira and aaas

DIOPT Version :9

Sequence 1:NP_572401.2 Gene:Hira / 31680 FlyBaseID:FBgn0022786 Length:1047 Species:Drosophila melanogaster
Sequence 2:XP_002936677.1 Gene:aaas / 100485071 XenbaseID:XB-GENE-967146 Length:519 Species:Xenopus tropicalis


Alignment Length:317 Identity:66/317 - (20%)
Similarity:103/317 - (32%) Gaps:120/317 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KPAWVHHDDKQIFSVDIHKDCTKFATGGQGSDCGRVVIWN---LLPVLSDKAEFDADVPKMLCQM 66
            |.|::||.:      .|.|.|..              .|:   |...|.:.:....:||..||.:
 Frog    66 KTAFIHHKE------SIWKRCLN--------------AWHNVGLAGFLEEMSNSKEEVPPWLCHV 110

  Fly    67 DQ------------------HLAC-------------------VNCVRWSQNGQNLASGSDDKLI 94
            .:                  ||..                   :....|..:....|....|..|
 Frog   111 ARCSLAVCRSVSSLHGSLFPHLTMKSEDLTAEFSQALDWADSPLRAFAWHPHTNKFALALLDDSI 175

  Fly    95 MIWRKSAGSSGVFGTGGMQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQ 159
            .|:  :|||..:     ....|...|          ||..:||.|....:.:.:..:.|::|...
 Frog   176 RIY--TAGSPTI-----PTLKHRLQK----------DVASMAWKPMCASVLAVACQSCVLVWHVD 223

  Fly   160 AFPHSVAT--------LKGHTG--LVKGVSWDPLGRFLASQSD-DRSIKIWNTMNWSLSHTITEP 213
              |.|::|        :..|.|  .|..|.|.|.|..|.|.|. |.::.:|:.           |
 Frog   224 --PTSLSTRPSSGCAQVLSHPGHSPVTSVCWSPKGGVLLSASPVDTAMLVWDV-----------P 275

  Fly   214 FEEC--------GGTTHILRLSWSPDGQYLVSAHAMNGGGPTA--QIIEREGWKCDK 260
            .|.|        ||.|.   |||||||..:::|      .|:.  ::.|.:.|.|::
 Frog   276 TESCIPLQRVGGGGVTF---LSWSPDGSKVLAA------TPSCVFRVWETQKWTCER 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HiraNP_572401.2 WD40 <12..370 CDD:225201 62/310 (20%)
WD40 14..349 CDD:238121 62/308 (20%)
WD40 repeat 16..68 CDD:293791 10/54 (19%)
WD40 repeat 74..127 CDD:293791 10/52 (19%)
WD40 repeat 132..169 CDD:293791 9/44 (20%)
WD40 repeat 176..211 CDD:293791 9/35 (26%)
WD40 repeat 223..263 CDD:293791 12/40 (30%)
WD40 repeat 275..322 CDD:293791
WD40 repeat 328..350 CDD:293791
HIRA_B 423..442 CDD:286531
Hira 629..820 CDD:284895
aaasXP_002936677.1 WD40 152..413 CDD:392136 50/211 (24%)
WD40 repeat 155..190 CDD:293791 8/41 (20%)
WD40 repeat 196..240 CDD:293791 9/45 (20%)
WD40 repeat 248..286 CDD:293791 12/48 (25%)
WD40 repeat 290..328 CDD:293791 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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