DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxn3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001038728.2 Gene:foxn3 / 692291 ZFINID:ZDB-GENE-060512-39 Length:441 Species:Danio rerio


Alignment Length:568 Identity:155/568 - (27%)
Similarity:218/568 - (38%) Gaps:220/568 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   544 PETPP-------GAALLPGT---YYATSTTSAGTTTTTLQARSLQLSVSPPPPNMTPTSQVHNGS 598
            |..||       |.::..|.   |.|:|.|.|     ..:|..:.|::        ||.::..||
Zfish     3 PVMPPSKKPESSGVSVASGLSQFYQASSITRA-----LQEAEEMDLAL--------PTIKLEKGS 54

  Fly   599 LGGGGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHTSTPQYSVSKNGANGY 663
            :                                ||.    :|...:.||.       |||..|.:
Zfish    55 V--------------------------------EDE----ELTNLNWLHE-------SKNLLNSF 76

  Fly   664 GNG--NSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEI 726
            |:.  .|.........:||....| :::|||...:.|.|||||||.|||||||.:..|.||||:|
Zfish    77 GDPVLRSVSPVQDLDDDTPPSPAH-SDLPYDAKQNPNCKPPYSFSCLIFMAIEDAPSKRLPVKDI 140

  Fly   727 YAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEK--APNMGKGSLWRVEPQQRQNLIQALNR 789
            |.||::|||||..||.||||||||||||||.|.||:|  :.::||||||.::|:.||||||||.:
Zfish   141 YNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKDRSQSIGKGSLWCIDPEYRQNLIQALKK 205

  Fly   790 SPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGSGSVSSAQPVAGGAGVPAAAAVALSTP--TKSN 852
            :|:.|.|.|....|:  ||   .||.|:         |:.|:..|            :|  .|:.
Zfish   206 TPYHPYSQVFTTPPT--SP---QAYQSM---------SSPPIWPG------------SPFYRKNK 244

  Fly   853 GLALANGASQATNAARPHSPNGGGSGSHARFDPYLFPNLSKAFRNIREDTVGQPMLQDALDDELS 917
            |:.|........|.||..|..             |||.:             :|:          
Zfish   245 GVLLQVPQGVIQNGARMMSQG-------------LFPGI-------------RPL---------- 273

  Fly   918 GDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSNANGASDGINFARLARDCGADSIDDVHAAAAM 982
                                                                  .|:.:.:..|.
Zfish   274 ------------------------------------------------------PINPIVSRTAA 284

  Fly   983 LYLKHGPKIYS--EPFQNGSGPVITSSPSEDHTYSAGGNSNADSGSSTPLTNGNALASVAQAVAQ 1045
            :....|.:|.|  ||.||  .|:.||.|.||||||...:|.:|                |:..||
Zfish   285 VRSVLGYRITSDTEPTQN--SPLATSDPKEDHTYSFAKSSGSD----------------AEEEAQ 331

  Fly  1046 GQNNQGGAGSDSNCASSDAAYDSSEENHNITPEEMADRQRHRDGVDAL 1093
            ..      ||:.|..:::...|:.:::.:...:|..:.     .||||
Zfish   332 CD------GSELNFHTNETGSDAEDDDKSKIKKEPKEW-----SVDAL 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 59/86 (69%)
foxn3NP_001038728.2 Forkhead 114..200 CDD:306709 58/85 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5337
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24864
orthoMCL 1 0.900 - - OOG6_108124
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.760

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