DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxl3

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001419358.1 Gene:Foxl3 / 680273 RGDID:1594158 Length:231 Species:Rattus norvegicus


Alignment Length:131 Identity:45/131 - (34%)
Similarity:65/131 - (49%) Gaps:15/131 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   646 LHTSTPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTN-NKPPYSFSSLI 709
            |.|..|.....|:|:.|...|:.  .|...||:...:          .|.|.| .|...|:.:||
  Rat     4 LTTILPAAPTRKSGSQGQHTGDP--GGRFQGSHRSGR----------GLCHQNLTKTRESYIALI 56

  Fly   710 FMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAP--NMGKGSL 772
            .|||:.|....:.:..||.:|::.|||::.....|:||:|||||||..||||.:..  :.|||:.
  Rat    57 AMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSIRHNLSLNSCFVKVPRTEGHDKGKGNY 121

  Fly   773 W 773
            |
  Rat   122 W 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 32/76 (42%)
Foxl3NP_001419358.1 FH_FOX 51..139 CDD:469596 31/72 (43%)

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