DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and Foxj2

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_068699.1 Gene:Foxj2 / 60611 MGIID:1926805 Length:565 Species:Mus musculus


Alignment Length:478 Identity:125/478 - (26%)
Similarity:185/478 - (38%) Gaps:105/478 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   630 DNEDSLKEFDLVVSSRLHTSTPQY-SVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNV--PY 691
            |.|.||...|.:....|..:..:. |.|:.|..|           ||...:|.....||..  ..
Mouse     4 DLESSLTSIDWLPQLTLRATIEKLGSASQAGPPG-----------GARKCSPGSPTDPNATLSKD 57

  Fly   692 DPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNK 756
            :..||.:.||.||:::||..||..|..|.:.:.|||.||..:|||:|.|..|||||:||||||||
Mouse    58 EAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNK 122

  Fly   757 SFVKVEK-APNMGKGSLWRVE--PQQRQNLIQALNRSPFFPNSAVDKISP---SLKSPSGGSAYD 815
            .|.||.: ..:.||||.|.::  |.     |....|.|  |:..:.:.||   :.|||.||    
Mouse   123 CFRKVPRPRDDPGKGSYWTIDTCPD-----ISRKRRHP--PDDDLSQDSPEQEASKSPRGG---- 176

  Fly   816 SLDGGGSGSVSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGA--SQATNAARP-HSPNGGGS 877
             :.|.|..|:|...........|::.|.....|...:|.|:|.||  .::|..|.| ::.|....
Mouse   177 -VPGSGEASLSHEGTPQMSLQSPSSVANYSQGPGSVDGGAVAAGAPGQESTEGAPPLYNTNHDFK 240

  Fly   878 GSHARFDPYLFPNLSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNY-------- 934
            .|::..:   |.:||.:|||:.:..:.:..........|.||...:||     .|.|        
Mouse   241 FSYSEIN---FQDLSWSFRNLYKSMLERSSSSQHGFSSLLGDMPPSNN-----YYVYQQQQQQQP 297

  Fly   935 ---------------MGANGSGGAGSGGVGSNANGASDGINFARLARDCGADSIDDVHAAAAMLY 984
                           ..|...|.:..||.......:.||..... .:..||:.            
Mouse   298 PPQPQPPPQQPQPQQQQAPTQGPSNVGGAPPLHTPSPDGCTTPG-GKQAGAEG------------ 349

  Fly   985 LKHGP----KIYSEPFQNGSGPVITSSPSEDHTYSAGGNSNADSGSSTPLTNGNALASVAQAVAQ 1045
              :||    .::..|.|:|.     ..|.:.|.:|       ......|.....:.||:      
Mouse   350 --YGPPTGMAMHPPPLQHGG-----YHPHQHHPHS-------HPAQQPPQPQAQSQASI------ 394

  Fly  1046 GQNNQGGAGSDSNCASSDAAYDS 1068
              |:.|.|.....|::.|:..:|
Mouse   395 --NSTGFAFPPDWCSNIDSLKES 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 42/87 (48%)
Foxj2NP_068699.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..61 9/42 (21%)
Forkhead 66..143 CDD:278670 41/76 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..233 34/119 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..399 20/143 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..565
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.