DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and foxe1

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_005159967.1 Gene:foxe1 / 567676 ZFINID:ZDB-GENE-061116-1 Length:354 Species:Danio rerio


Alignment Length:315 Identity:81/315 - (25%)
Similarity:122/315 - (38%) Gaps:89/315 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   700 KPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKA 764
            |||||:.:||.|||..|.::.|.:..||.:|.:.||:::.....|:||:||||:||..|:|:.:.
Zfish    40 KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNLTLNDCFIKIPRE 104

  Fly   765 PNM-GKGSLWRVEPQQRQNLIQA---------LNRSPFFPNSAVDKISPSL------KSPSGGSA 813
            |.. |||:.|.::| ..:::.::         ..||.|...|:....||..      :|....|.
Zfish   105 PGRPGKGNYWALDP-NAEDMFESGSFLRRRKRFKRSDFTTYSSYVHESPVFSPVQIARSAYANSV 168

  Fly   814 YDSLDGG-------GSGSVSSAQP--VAGGAGV-----------------------------PAA 840
            |.::...       .|....|:.|  .||.:.|                             |.:
Zfish   169 YSNMAVSPPYAQQLPSAYYQSSSPNFTAGQSRVFRINSLIGSPSRMGQNAEMIPQQSCRSFSPES 233

  Fly   841 AAVALSTP----TKSNG-LALANGASQATNAARPHSPNGGG-------SGSHARFDP---YLFPN 890
            .:.:|..|    ...|| ..|:..:|.:.|.|..:|..|.|       ..|...:.|   ....:
Zfish   234 GSCSLGGPGFQHQSCNGETVLSCYSSSSNNMAFAYSGPGHGQTQVSYPQASTQHYGPAGRMAISS 298

  Fly   891 LSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGS--KYNYMGANGSGGA 943
            ||.    |..|.||.|             |...:....||  :||..||.||.||
Zfish   299 LSP----IAGDAVGDP-------------YGRTSPAQLGSFVQYNNSGAVGSSGA 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 34/85 (40%)
foxe1XP_005159967.1 FH 40..128 CDD:214627 34/88 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.