DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxi3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001102819.1 Gene:Foxi3 / 502846 RGDID:1561816 Length:400 Species:Rattus norvegicus


Alignment Length:456 Identity:115/456 - (25%)
Similarity:171/456 - (37%) Gaps:127/456 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 VLSTPAHVASPETPPGAALLPGTYYATSTTSAGTTTTTLQARSLQLSVSPPPPNMTPTSQVHNGS 598
            |.|.||..|:|..||           ||....|          |....:||.....|...     
  Rat    10 VYSQPAAAAAPGAPP-----------TSRAPYG----------LSDYAAPPAAAANPYLW----- 48

  Fly   599 LGGGGGGGGGSGGG---------GGGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHTSTPQYS 654
            |.|.|.||..|..|         |...||.|:.|.:..::                         
  Rat    49 LNGPGVGGPASAAGYLGAPPPPPGAAPGAFLQPPAAPGTF------------------------- 88

  Fly   655 VSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEK 719
              .....|:...::....|.|||..|.:....:....:.|:.. .:||||:|:||.|||:.:.|:
  Rat    89 --AGAQRGFTQPSAAAPASPAGSAAPGELGWLSMASREDLMKM-VRPPYSYSALIAMAIQSAPER 150

  Fly   720 ALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEK-APNMGKGSLWRVEPQQRQNL 783
            .|.:..||.::..:||:::.:..||:||:|||||||..|.||.: ..:.|||:.|.::|      
  Rat   151 KLTLSHIYQFVADNFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDP------ 209

  Fly   784 IQALNRSPFFPNSAVDK-------ISPSLKSPSGGSAYD----------SLDGGGSGSV----SS 827
                |....|.|....:       .|.:|..|||.|..|          .|:|....|:    .|
  Rat   210 ----NCEKMFDNGNFRRKRRRRAEASSNLTVPSGTSKSDGQSSRLRVSGKLEGDSPSSMLRPSQS 270

  Fly   828 AQPVAG---GAGVPAAAAVALSTP------TKSNGLALANGASQATNAARPHS---PNGGGSGSH 880
            .:|..|   .|..|.|:.:. |||      :..|.|:: |.:|.:|....|.|   |.|....|.
  Rat   271 PEPPEGTKSTASSPGASTLT-STPCLNTFLSSFNTLSV-NASSMSTQRTLPGSRRHPGGTQLPSS 333

  Fly   881 ARFDPYLFPNLSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSK--------YNYMGA 937
            ..|.....|:.|  ..:::..|||.       ..:|| .|::..:..||.:        ||:...
  Rat   334 TTFPSTSIPDSS--LDSVQLSTVGG-------GSQLS-SYYSPFSGGSGDQSSPFGSPFYNFSMV 388

  Fly   938 N 938
            |
  Rat   389 N 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 35/85 (41%)
Foxi3NP_001102819.1 Forkhead 131..217 CDD:278670 37/95 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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