DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxj2

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_031760837.1 Gene:foxj2 / 448174 XenbaseID:XB-GENE-483646 Length:522 Species:Xenopus tropicalis


Alignment Length:515 Identity:117/515 - (22%)
Similarity:185/515 - (35%) Gaps:158/515 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   651 PQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDP---------LVHTNNKPPYSFS 706
            ||.::.   |...|:..:|....|.||            |.||         ..|.:.|||||::
 Frog    26 PQLTIQ---AAMKGSQQNNAGRKGPGS------------PTDPSAMLSKEEAAAHRDGKPPYSYA 75

  Fly   707 SLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEK-APNMGKG 770
            :||..||..:..|.:.:.|||.||..:|||::.|..|||||:||||||||.|.||.: ..:.|||
 Frog    76 NLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWKNSIRHNLSLNKCFRKVPRPRDDPGKG 140

  Fly   771 SLWRVEPQQRQNLIQALNRSPFFPNSAV--DKISPSL-KSPSGGSAYDSLDGGGSGSVSSAQPVA 832
            |.|.::...::::.....:.| .|:..|  |.....: |||...::..|:...|    :...|:.
 Frog   141 SYWMIDSCPKEDVALPRRKRP-HPDDEVSQDSFEQDVNKSPLRSASEVSMPQEG----TQGHPMN 200

  Fly   833 GGAGVPAAAAVALSTPTKSNGLALANGASQATNAARP---HSPNGGGSGSHA-RFDPYLFPNLSK 893
            ..:.:|:                    .|||.....|   .:|....:..:. .|....||:|..
 Frog   201 NNSPLPS--------------------YSQANPTQMPPDSRAPTYNNNDCYKFSFSESTFPDLGC 245

  Fly   894 AFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSNANGASDG 958
            :||::                     ||           :.:|..|..|                
 Frog   246 SFRSL---------------------YH-----------SLLGKQGERG---------------- 262

  Fly   959 INFARLARDCGADSIDDVHAAAAMLYLKHGPKIYSE-------PFQNGSGPVITSSPSEDHTYSA 1016
                      ..|..:.:.:...:      |.::||       .:|..||    ::||..|.:  
 Frog   263 ----------DKDLYNSMQSKQVL------PPVHSEVQSSSCCMYQQNSG----AAPSNLHPH-- 305

  Fly  1017 GGNSNADSGSSTPLTNGNALASVAQAVAQGQNNQGGAGSDSNCASSD--AAYDSSEENHNITPE- 1078
                |..|.|..|..:..|.......:.|.|..:..|...|....||  :..||.:|:..|... 
 Frog   306 ----NVPSISGPPPPHHQAQHQQPPYLPQQQMPRPPAPGMSLGLPSDWCSNIDSLKESFKIVSSL 366

  Fly  1079 --EMADRQRHRDGVDAL-------LSLSGSSIVE-CGSVATTHYHSNGSSG---SSHGSP 1125
              ...|..:..|.:::|       .||....|.. |.|::    |...::|   .:||.|
 Frog   367 DWSSVDLSQFSDLMESLRQAELKNWSLDQDHIASLCDSLS----HLLSTTGLLPPTHGQP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 40/85 (47%)
foxj2XP_031760837.1 FH_FOXJ2 68..149 CDD:410825 40/80 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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