DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and foxq1b

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_998072.1 Gene:foxq1b / 405843 ZFINID:ZDB-GENE-040426-2090 Length:283 Species:Danio rerio


Alignment Length:155 Identity:54/155 - (34%)
Similarity:78/155 - (50%) Gaps:14/155 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   665 NGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNN-KPPYSFSSLIFMAIEGSNEKALPVKEIYA 728
            :|:.:.|..|.|:..|..:..|         :|.. |||||:.:||.|||..||...|.:.||..
Zfish    18 DGDCSANSPGPGAPVPDGKAKP---------YTRRPKPPYSYIALIAMAIRDSNTGRLTLAEINE 73

  Fly   729 WIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPN--MGKGSLWRVEPQQRQNLIQALNRSP 791
            ::::.||:|:.:..||:||||||||||..|:||.:.|:  .||.:.|.:.|.........:.|..
Zfish    74 YLMKKFPFFRGSYTGWRNSVRHNLSLNDCFLKVLRDPSRPWGKDNYWMLNPHSEYTFADGVFRRR 138

  Fly   792 FFPNSAVDKISPSLKSPSGGSAYDS 816
              ......||..|.:||....|.||
Zfish   139 --RKRISKKILGSAESPERVPADDS 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 38/86 (44%)
foxq1bNP_998072.1 FH 45..134 CDD:214627 38/88 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.