DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and croc

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster


Alignment Length:622 Identity:137/622 - (22%)
Similarity:211/622 - (33%) Gaps:256/622 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   614 GGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSGAGSN 678
            |.|.|:..:..|.||             .::..|.:..|||.....|:.||.|            
  Fly    21 GYGSASAVAAASSAS-------------AAAAAHYAYDQYSRYPYSASAYGLG------------ 60

  Fly   679 TPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNG 743
            .|.:.|.        :|    |||||:.:||.|||:.:.:|.:.:..||.:|::.|||::....|
  Fly    61 APHQNKE--------IV----KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQG 113

  Fly   744 WKNSVRHNLSLNKSFVKV---EKAPNMGKGSLWRVEPQ-----------------QRQNLI---- 784
            |:||:|||||||:.||||   :|.|  ||||.|.::|.                 ::::::    
  Fly   114 WQNSIRHNLSLNECFVKVARDDKKP--GKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKE 176

  Fly   785 QALNRSPFFPNSAVDKISPSLKSPSGG-------------------------------------S 812
            :|:.|.... |..:.::.| ||..:.|                                     |
  Fly   177 EAIKRQAMM-NEKLAEMKP-LKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNS 239

  Fly   813 AYDS------LDGGG--------SGSVSSAQPVAGGAGVP------AAAAVALSTPTKSNGLALA 857
            .:||      |.|||        ...::...|....:..|      ..|.||.|.....:..|.|
  Fly   240 CHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAA 304

  Fly   858 NGASQ----ATNAARPHSPNGGGSGSHAR------------------FDPYLFPNLSKAFRNIRE 900
            :.|.|    ..:.|.|.:|.|.|:|..:.                  :.|              |
  Fly   305 HHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTP--------------E 355

  Fly   901 DTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSNANGASDGINFARLA 965
            ....:|:..:......:...|||||::|...:|.:|..|.||.|.||                  
  Fly   356 TPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGG------------------ 402

  Fly   966 RDCGADSIDDVHAAAAMLYLKHGPKIYSEPFQNGSGPVITSSPS-----EDHTYSAGGNSNADSG 1025
                                             ||..|:||||:     .|..:....:...|:|
  Fly   403 ---------------------------------GSSSVLTSSPTSALGFRDMIFEQNQSCQLDTG 434

  Fly  1026 SST-PLTNGNALASVAQAVAQGQNNQGGAGSDSNCASSDAAYDSSEENHNITPEEMADRQRHRDG 1089
            |.| .|.:.:..||.:.|.|.              |::.||..||..:|:          .|.  
  Fly   435 SPTGSLQSASPPASASVAAAS--------------AAAAAAVISSHHHHH----------HHH-- 473

  Fly  1090 VDALLSLSGSSIVECGSVATTHYHSNGSSGSSHGSPH 1126
                .:||| ::.:.|.:          |..||..||
  Fly   474 ----AALSG-NLGQLGQL----------SNLSHYRPH 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 39/77 (51%)
crocNP_524202.1 FH_FOX 69..159 CDD:469596 41/95 (43%)

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