Protein Alignment CHES-1-like and Foxc1

DIOPT Version :9

• Sequence 1: NP_001259311.1
• Gene: CHES-1-like / 31678
• FlyBaseID: FBgn0029504
• Length: 1268
• Species: Drosophila melanogaster
• Sequence 2: NP_599165.1
• Gene: Foxc1 / 364706
• RGDID: 1589718
• Length: 553
• Species: Rattus norvegicus
• Alignment Length: 735
• Identity: 168/735 - (22%)
• Similarity: 241/735 - (32%)
• Gaps: 292/735 - (39%)

  Fly   572 LQARSLQLSVSPPPP-NMTPTSQVHNGSLGGGGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSL 635
            :|||   .|||.|.. .:.|       .|||.......:....|||...:.:|.|..|:
  Rat     1 MQAR---YSVSSPNSLGVVP-------YLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSH------ 49

  Fly   636 KEFDLVVSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNK 700
                           |.:      |..|..|.:.    ..|..|||.|      |.|.:     |
  Rat    50 ---------------PAH------AEQYPGGMAR----AYGPYTPQPQ------PKDMV-----K 78

  Fly   701 PPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKV---E 762
            ||||:.:||.|||:.:.:|.:.:..||.:|:..||:::....||:||:|||||||:.||||   :
  Rat    79 PPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDD 143

  Fly   763 KAPNMGKGSLWRVE--------------------------------------------------- 776
            |.|  ||||.|.::
  Rat   144 KKP--GKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKGRLHLQEPPPPQAGRQPAPA 206

  Fly   777 -----------PQQRQNLIQALNR---------SPFFPNSAVDKIS----PSLKSPSGGSAYDSL 817
                       |||....||.:..         .|..|.:|:...|    |.::||...|:  ||
  Rat   207 PPEQAEGSAPGPQQPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAATVPKIESPDSSSS--SL 269

  Fly   818 DGGGS--GSVSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGASQATNAARPHSPNGGGSGSH 880
            ..|.|  ||:.||:|::..|..||........|..|.|.::.|..:         |..|...||.
  Rat   270 SSGSSPPGSLPSARPLSLDAAEPAPPPQPAPPPHHSQGFSVDNIMT---------SLRGSPQGSA 325

  Fly   881 ARFDPYLFPNLSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGS 945
            |.....|..:.:.:.|    ..:..|:...|.....|..|.:..:.:|.:     |::|.||.|.
  Rat   326 AELGSGLLASAAASSR----AGIAPPLALGAYSPGHSSLYSSPCSQSSSA-----GSSGGGGGGG 381

  Fly   946 GGVGSNANGASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKIYSEPFQNGSGPVITSSPSE 1010
            ||.|.:::.|..|
  Rat   382 GGGGGSSSAAGTG---------------------------------------------------- 394

  Fly  1011 DHTYSAGGNSNADSGSSTPLTNGNALASVAQAVAQGQNNQGGAGSDSNCASSDAAYDSSEENHNI 1075
                          |::|...|..|: |:..|..:|.:.||.||     ....||.|....::::
  Rat   395 --------------GAATYHCNLQAM-SLYAAGERGGHLQGPAG-----GGGSAAVDDPLPDYSL 439

  Fly  1076 TPEEMADRQRHRDGVDALLSLSGSSIVECGSVATTHYHSNGSSGSSHGSPHKRASSHSLEEEHLQ 1140
            .|                              ||    |:.||..|||...:..|.|...
  Rat   440 PP------------------------------AT----SSSSSSLSHGGGGQETSHHPAS----- 465

  Fly  1141 QHREQQLQQQQQQQQHHHQQFGSSQAVYTNGSGSKMALLSSAAANVALA--QQQQQQIH--QDMY 1201
                             ||  |...:.|.|.:|..:..|:||||..|.|  ..|||..|  ::|:
  Rat   466 -----------------HQ--GRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMF 511

  Fly  1202 -SSTAGHNASMYLGGLNSHC 1220
             |...|.|.|...|  ||.|
  Rat   512 ESQRIGLNNSPVNG--NSSC 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHES-1-like	NP_001259311.1	Forkhead	700..785	CDD:278670	41/149 (28%)
Foxc1	NP_599165.1	FH	78..166	CDD:214627	38/89 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2294
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1270467at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820